植物学报

• 研究论文 • 上一篇    下一篇

基于转录组数据的糜子株高关键候选基因鉴定

代春阳1,常博1,崔秀妍1,张谊婷1,李蕊1,赵世珂1,田翔1,陈凌2,乔治军3,王海岗3,王君杰4   

  1. 1. 山西农业大学农学院
    2. 山西省农业科学院农作物品种资源研究所/农业部黄土高原作物基因资源与种质创制重点实验室/杂粮种质资源发掘与遗传改良山西省重点实验室
    3. 山西省农业科学院农作物品种资源研究所
    4. 山西农业大学农业基因资源研究中心
  • 收稿日期:2025-10-23 修回日期:2025-12-29 出版日期:2026-01-15 发布日期:2026-01-15
  • 通讯作者: 王君杰
  • 基金资助:
    糜子光周期基因挖掘及精细定位

Transcriptome analysis and identification of key candidate genes associated with plant height in broomcorn millet

1,   

  • Received:2025-10-23 Revised:2025-12-29 Online:2026-01-15 Published:2026-01-15

摘要: 摘 要 株高是影响糜子(Panicum miliaceum)抗倒伏和产量的关键农艺性状之一,解析其调控机制对推动糜子遗传改良和高产育种具有重要意义。本研究通过多组学方法,以高秆野生型糜子J08及其矮秆突变体AJ08为材料,通过整合大田和盆栽环境下表型、转录组与植物激素数据,筛选调控糜子株高的关键基因。试验结果表明,AJ08的株高与各节间长度均显著低于J08,且J08的赤霉素(GA)含量是AJ08的1.9倍以上。转录组数据分析共筛选出7454个差异表达基因,差异基因主要集中在植物激素信号转导、二萜类化合物生物合成等通路中。其中富集了GA合成和分解相关基因(KAO、GA2ox1、GA20ox1B)、信号转导基因(GAI、BKI1、XTH24)及生长素响应基因(SAUR32、GH3.8)。本研究推测AJ08的矮化表型主要由赤霉素合成关键基因KAO(C2845_PM13G01100)与GA20ox1B(C2845_PM02G40950)的下调所致。

关键词: 糜子, 株高, 植物激素, 转录组测序, 植物信号转导

Abstract: INTRODUCTION: Plant height is one of the key agronomic traits influencing lodging resistance and yield in Broomcorn millet (Panicum miliaceum). Elucidating its regulatory mechanism is of great significance for advancing genetic improvement and high-yield breeding in this crop. RATIONALE: This study employed a multi-omics approach, utilizing the tall wild-type broomcorn millet J08 and its dwarf mutant AJ08. By integrating phenotypic data, transcriptomic profiles, and phytohormone levels from both field and pot environments, key genes involved in regulating plant height in broomcorn millet were screened. RESULTS: The plant height and individual internode lengths of AJ08 were significantly lower than those of J08. The gibberellin (GA) content in J08 was more than 1.9 times higher than in AJ08. Transcriptome data analysis identified a total of 7,454 differentially expressed genes, which were predominantly enriched in pathways such as plant hormone signal transduction and diterpenoid biosynthesis. Among these, genes related to GA synthesis and degradation (KAO, GA2ox1, GA20ox1B), signal transduction genes (GAI, BKI1, XTH24), and auxin-responsive genes (SAUR32, GH3.8) were notably enriched. CONCLUSION: Based on the findings, it is inferred that the dwarf phenotype of AJ08 is primarily due to the downregulation of key gibberellin biosynthesis genes, specifically KAO (C2845_PM13G01100) and GA20ox1B (C2845_PM02G40950).

Key words: Plant height, Broomcorn millet, Hormones, RNA-Seq, Plant Signal Transduction