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  • Hosted by:Chinese Academy of Sciences
    Sponsored by:Institute of Botany, Chinese Academy of Sciences, Botanical Society of China
    Co-hosted by:Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences
    Institute of Biotechnology and Germplasm Resources, Yunnan AgriculturalAcademy
    Fujian Agriculture and Forestry University
    Hunan Provincial Key Laboratory of Phytohormones and Growth Development, Hunan Agricultural University
    State Key Laboratory of Crops Biology, Shandong Agricultural University

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Table of Content
Cloning and Functional Analysis of the 5'-nucleotidase Genes Catalyzing NMN Degradation to NR in Brassica oleracea var. acephala
Ru Liu, Yang Li, Zhaocheng Tang, Tingting Hao, Baolong Zhang
Chinese Bulletin of Botany. 2025, 60(3):  1-0.  doi: 10.11983/CBB24139   cstr: 32102.14.CBB24139
Abstract ( 82 )   PDF (1891KB) ( 101 )   Save
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INTRODUCTION: Nicotinamide mononucleotide (NMN) has important biological activities such as anti-cancer, anti-aging and improving crop stress resistance, and its importance as a nutritional health product has been established. However, the content of NMN in plants is low, and the metabolic pathway of NMN degradation is poorly understood. It has been reported that 5'-nucleotidases can catalyze the dephosphorylation of NMN in saccharomyces cerevisiae. At present, 5'-nucleotidases have been isolated in plants, but whether they can catalyze the degradation of NMN remains unclear. Edible kale has high nutritional value. It is important to analyze the metabolic pathway of NMN in kale and increase the content of NMN by blocking the degradation pathway. 

RATIONALE: The degradation of NMN in plants is closely related to the NAD+ remediation synthesis (pyridine nucleotide cycle) pathway. Compared with bacteria and mammals, studies on the synthetic pathway of NAD+ remediation in plants mainly use isotope tracer method, lack specific gene and function analysis, and only a few related studies have been reported in plants. Eight 5'-nucleotidase genes were cloned from Collard cabbage, heterologous expression of them was performed by Escherichia coli expression system, and the catalytic properties of 5'-nucleotidase were investigated by enzymological means in vitro

RESULTS: In this study, ten 5'-nucleotidase genes were retrieved from the kale genome. Based on these sequences, eight 5'-nucleotidase candidate genes were successfully cloned from Brassica oleracea var. acephala, which laid a foundation for further revealing the degradation pathway of NMN. Phylogenetic analysis revealed that 5'-nucleotidase is conserved in plants, suggesting that it may play an important role in plant nucleotide metabolism. The catalytic properties of 5'-nucleotides in kale were investigated by using the expression system of Escherichia coli. In vitro enzymatic experiments showed that 5'-nucleotides can catalyze purine, pyrimidine and pyridine nucleotides, and have a wide range of substrate adaptability. Specifically, BolN2, BolN5-X1 and BolN6 can catalyze the dephosphorylation of NMN to the generation of NR, which proves that 5'-nucleotidase can catalyze the degradation of NMN in plants. In addition, BolN2, BolN5 and BolN6 can catalyze the hydrolysis of pyridine nucleotides NaMN, purine and pyrimidine nucleotides (including AMP, GMP, CMP and UMP). However, BolN7 and BolN8 have only weak catalytic activity against GMP. 

CONCLUSION: In conclusion, the 5'-nucleotidase gene from the HAD and SurE families of Collard Brassica oleracea var. acephala was cloned and phylogenetic analysis showed that it was conserved in plants. By constructing prokaryotic expression vector, 5'-nucleotidase was expressed and purified in Escherichia coli. The results of enzymatic reaction in vitro showed that BolN2, BolN5-X1 and BolN6 could catalyze the degradation of NMN to produce NR. In addition, BolN2, BolN5 and BolN6 have catalytic effects on NaNM, purine and pyrimidine nucleotides. This study further enhanced our understanding of the NMN metabolic pathway in kale, and provided a theoretical basis for creating edible kale with high NMN content.

Analysis of physicochemical characteristics and expression characteristics of lagerstroemia GolS family genes
Tiantian Xu, Yi Cao, Peijian Yang, Fan Yang, Xiaoxi Zhou, Hui Wei, Yanhong Chen
Chinese Bulletin of Botany. 2025, 60(3):  1-0.  doi: 10.11983/CBB24118   cstr: 32102.14.CBB24118
Abstract ( 96 )   PDF (2252KB) ( 113 )   Save
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INTRODUCTION: Galactinol synthase (GolS) is a key enzyme in the biosynthetic pathway of raffinose family oligosaccharides (RFOs), providing the activated galactosyl group for the biosynthesis and accumulation of RFOs in plants. It plays an important role in plant responses to abiotic stresses. 

RATIONALE: Although the role of GolS in plant stress responses has been extensively studied, little is known about the molecular characteristics of the GolS gene family (LiGolS) in Lagerstroemia indica. This study aims to identify the members of the LiGolS gene family, analyze their physicochemical properties, gene structure, and expression patterns, and explore their potential functions in salt stress response. 

RESULTS: A total of 13 LiGolS gene family members were identified at the whole-genome level and were classified into three subfamilies based on phylogenetic relationships. These genes were unevenly distributed across 10 chromosomes. The isoelectric points of the 13 LiGolS proteins ranged from 4.75 to 9.45, with molecular weights varying from 37.69 to 46.12 kDa and amino acid counts ranging from 327 to 404. Subcellular localization prediction revealed that six proteins were localized to chloroplasts, one to mitochondria, five to the cytoplasm, and one to vacuoles. Additionally, the number of exons in the 13 gene members ranged from 0 to 4. Expression analysis under salt stress showed that all LiGolS genes were upregulated to varying degrees after salt treatment, suggesting their potential involvement in salt stress response in Lagerstroemia indica

CONCLUSION: This study systematically identified and characterized the LiGolS gene family members in Lagerstroemia indica for the first time, including their physicochemical properties, gene structure, and expression patterns. These results lay the foundation for further functional analysis of LiGolS genes and provide theoretical insights into their roles in stress responses.

Population Genetic Structure and Climate Adaptation Analysis of an Endemic Bamboo, Brachystachyum densiflorum
Ruli Zhang, Dezhu Li, Yuxiao Zhang
Chinese Bulletin of Botany. 2025, 60(3):  1-0.  doi: 10.11983/CBB24094   cstr: 32102.14.CBB24094
Abstract ( 162 )   PDF (2172KB) ( 450 )   Save
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INTRODUCTION: Genetic diversity is considered as a crucial aspect in assessment and conservation of rare and endangered species. Brachystachyum densiflorum is a species endemic to eastern China. In recent years, with rapid economic development, accelerated urbanization, and escalating pollutant emissions, the habitat of B. densiflorum has been continuously degraded, habitat fragmentation has intensified, and its populations have shown a tendency to decline. 

RATIONALE: Genetic diversity endows species with abundant genetic resources and plays a pivotal role in shaping their capacity to adapt to new environments. To elucidate the genetic diversity of B. densiflorum and evaluate the influence of climate change on its genetic variation, reduced-representation genome sequencing technology was employed to obtain single nucleiotide polymorphisms (SNPs), and subsequently population genetics and landscape genetics together with species distribution modelling were analyzed. 

RESULTS: Brachystachyum densiflorum had a moderate level of genetic diversity. Six populations were divided into two groups, and there was moderate differentiation (FST=0.102) and high gene flow (Nm=2.442) between them. Genotype-environment association analysis indicated that the two groups were diverged attributable to local adaptation to the climate. Temperature differentials and low-temperature regimes interacting together with precipitation gave rise to genetic variation of this species. In total, 544 adaptive loci were identified, which displayed significant correlations with temperature differentials, low-temperature factors (Bio2, Bio6, Bio11, and Bio7), and precipitation factors (Bio19). B. densiflorum migrated evidently northward from the Last Glacial Maximum to the current, with its distribution area increased by 89.5%. However, during the period from 2061 to 2080, the extent of the suitable area for this species will be contracted, and there will be partial degradation and fragmentation occurring in highly suitable areas within Anhui Province. 

CONCLUSION: Brachystachyum densiflorum showed a moderate level of genetic diversity and a moderate degree of genetic differentiation. Local adaptation drove the formation of the current genetic pattern of B. densiflorum, and temperature differences, low-temperature, and precipitation led to genetic variation. B. densiflorum has evidently migrated northward from the Last Glacial Maximum to the current with increase of distribution area. However, niche modelling indicated that during the period from 2061 to 2080, the suitable habitat area of B. densiflorum would be contracted, with partial degradation and fragmentation occurring in highly suitable areas within Anhui Province. These results have significant meanings for conservation and utilization of B. densiflorum.

Agrobacterium Rhizogenes-mediated Transformation System of Pueraria lobata
Wendan Zeng, Huabing Yan, Zhengdan Wu, Xiaohong Shang, Sheng Cao, Liuying Lu, Liang Xiao, Pinli Shi, Dong Cheng, Ziyuan Long, Jieyu Li
Chinese Bulletin of Botany. 2025, 60(3):  1-0.  doi: 10.11983/CBB24092
Abstract ( 110 )   PDF (13854KB) ( 106 )   Save
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To establish an efficient Agrobacterium rhizogenes-mediated transformation system of Pueraria lobata, in this study, tissue cultured seedlings were used as explants to explore the effects of different factors on efficiency of Agrobacterium rhizogenes-mediated transformation system of P. lobata. The results indicated that genotype was the most important limiting factor of all. A. rhizogenes K599 was identified to be the most suitable strain. The optimal explant material was immature leaves that had just unfolded from the first to second nodes of the 5th to 13th generation tissue culture seedlings subcultured for 8 days. After 3 days of pre-culture and 15 minutes of bacterial infection, the highest induction rate of hairy roots could up to be 22.4%. The optimal culture method for proliferation of hairy roots in P. lobata was solid medium culture, and the fresh weight of hairy roots grown on solid medium was 75 times that of hairy roots grown on liquid medium. The PCR analysis and fluorescence microscopy assays showed the expression of GFP and rolB gene in the hairy roots of P. lobata was stable, and the rate of co-transformation was 80%. In our study, an A. rhizogenes-mediated genetic transformation system of P. lobata was preliminarily established, which laid a foundation for gene function identification in P. lobata.
Advances in Coumarins Biosynthesis and their Functions in Iron Absorption in Plants
Jing Zhou, Fei Gao
Chinese Bulletin of Botany. 2025, 60(3):  1-0.  doi: 10.11983/CBB24106
Abstract ( 85 )   PDF (820KB) ( 395 )   Save
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Coumarins are a class of phenolic compounds with benzopyrone as the parent ring structure, which widely exist in higher plants. In recent years, studies have shown that root-secreted coumarins could promote iron absorption in plants. Here, the recent progress of the discovery and identification of genes related to the biosynthesis and regulation of plant root-secreted coumarins were reviewed, and the molecular mechanism of the biosynthesis, storage, secretion, and regulation of root-secreted coumarins was further elaborated. The mechanism of how coumarins could promote plant iron uptake also have been discussed. Finally, this paper gives a preliminary outlook on the future research directions to gain knowledge of these mechanisms, which could offer novel opportunities to generate iron deficiency tolerant crops and iron-biofortified crops

Advances in the Regulation of Alternative Splicing of Genes in Plants in Response to Abiotic Stress

Lianglin Xiong, Guolu Liang, Qigao Guo, Danlong Jing
Chinese Bulletin of Botany. 2025, 60(3):  1-0.  doi: 10.11983/CBB24189   cstr: 32102.14.CBB24189
Abstract ( 436 )   PDF (1604KB) ( 583 )   Save
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The external environment plays a crucial role in the growth and development of plants. However, the extreme climates that have occurred frequently in recent years have posed a serious threat to the growth and development of plants. Understanding the regulatory mechanisms of plant stress resistance is of great significance for ensuring the survival and development of plants (especially economic crops) and their yields. Alternative splicing is an important post-transcriptional regulatory mechanism and plays an important role in the diversity of plant gene functions and stress resistance. At present, a variety of alternative splicing variants of stress-resistant related genes have been identified in different plants, and some plant stress-resistant regulatory mechanisms mediated by alternative splicing of genes have been elucidated, effectively promoting the relevant theoretical basis for plant stress resistance research. Therefore, mining and identifying the alternative splicing regulatory mechanisms of more stress-resistant genes under abiotic stress play an important role in plant stress resistance research. This paper reviews the types and splicing mechanisms of alternative splicing of plant genes, focuses on expounding the research progress of plant stress resistance mediated by alternative splicing of related genes under abiotic stress and provides a prospect for the future direction of research on alternative splicing of plant genes.
Research Progress on Factors and Molecular Mechanisms Regulating Plant Organ Abscission
Xupeng Liu, Min Wang, Shouan Han, Xuehui Zhu, Yanmeng Wang, Minqi Pan, Wen Zhang
Chinese Bulletin of Botany. 2025, 60(3):  1-0.  doi: 10.11983/CBB24133   cstr: 32102.14.CBB24133
Abstract ( 84 )   PDF (1193KB) ( 148 )   Save
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The organs abscission is a phenomenon in which parts of organs are separated from the body. It is an adaptive strategy evolved by plants in the process of growth and response to environmental changes, which ensures the normal growth and adaptation of plants to the environment. This process involves the formation of abscission zones, activation of specific signals, cell separation, and is significantly regulated by its own physiological processes and external environmental factors such as light, temperature, and humidity. In agricultural production, the abscission of plant organs directly affects crop yield. Studying the regulatory mechanism of plant organ abscission is crucial for improving crop yield. In recent years, significant progress has been made in the study of organ abscission mechanisms. The results show that the mechanism of organ abscission in plants is conservative, but there are also significant variation among different species.This review will delve into the physiological and biochemical mechanisms of plant organ abscission, analyze the specific effects of different environmental factors, and the specific roles played by hormones and enzymes in this process. The aim is to provide solid theoretical support and practical guidance for crop genetic breeding and agricultural production.
The Regulation of Transcription Factor in Plant Response UV-B Radiation
Pengxiang Chen, Bo Wang, Zijun Wang, Rong Han
Chinese Bulletin of Botany. 2025, 60(3):  1-0.  doi: 10.11983/CBB24165   cstr: 32102.14.CBB24165
Abstract ( 102 )   PDF (1390KB) ( 133 )   Save
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UV-B, as an inherent constituent of sunlight, exerts a crucial influence on the growth and development of plants. With the deepening of researches, it is recognized that UV-B is not merely an environmental stressor, but also a significant signal molecule in the plant growth process, and moderate UV-B radiation has a certain promoting effect on plant growth. UVR8, as a unique photoreceptor specific to UV-B, plays an irreplaceable role in the plant’s response to UV-B, and the exertion of its specific functions still depends on transcription factors. Differentially expressed gene is a key element in the developmental process of multicellular eukaryotes, and transcription factors can regulate gene expression, thus transcription factors are typically the main regulatory genes for the development of such organisms. At present, a variety of transcription factors such as BBXs, WRKYs, MYBs, and PIFs have been reported to be involved in regulating processes like hypocotyl elongation, primary root length, leaf size and shape, flowering cycle, and anthocyanin synthesis under UV-B conditions. This article mainly reviews the molecular mechanisms of UVR8 in the UV-B signaling pathway and summarizes the regulatory mechanisms of transcription factors during the UV-B radiation process, and to provide reference for relevant research.