Chinese Bulletin of Botany

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Smart Breeding: Integration and Application from High-Throughput Phenotyping to Genome Selection

Chuangxin Wang1, 2, Jianqi Li,1, Ying Zhang1, Dong Han1, Jing Fang1, Enguang Zhao1, Hua Huang1, 2, Lingling Da1*, Ji Zhang1, 2*   

  1. 1College of Life Sciences, Northwest Normal University, Lanzhou 730070, China; 2Institute of New Rural Development, Northwest Normal University, Lanzhou 730070, China

  • Received:2025-08-30 Revised:2025-11-14 Online:2025-12-16 Published:2025-12-16
  • Contact: Lingling Da, Ji Zhang

Abstract: With global warming and population growth accelerating, crop breeding must advance towards greater precision, efficiency and sustainability. Riding the wave of rapid AI development, AI-driven Smart Breeding has emerged as the cutting edge of plant breeding. Leveraging technologies such as high-throughput phenotyping through machine learning and deep learning, genome-wide association studies for genomic selection, and multi-omics big data analysis, it integrates and edits genetic information while linking phenotypes with genomes. This approach promises revolutionary changes in agricultural breeding, enhancing crop productivity, improving quality, and refining traits. Looking ahead, precision agriculture and personalised breeding represent key developmental trajectories. Strategies focusing on environmental adaptability and climate change mitigation will aid in addressing ecological challenges. The cutting-edge technologies of smart Breeding, significantly enhancing breeding efficiency and precision, will shape the future direction and progress of plant breeding.

Key words: Smart breeding, High-throughput phenotyping, Machine learning, Genome-wide selection, Big data analysis