Chinese Bulletin of Botany ›› 2016, Vol. 51 ›› Issue (1): 98-106.DOI: 10.11983/CBB15011 cstr: 32102.14.CBB15011
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Yongshu Liang, Junjie Zhou, Wenbin Nan, Dongdong Duan, Hanma Zhang*
Received:
2015-02-12
Accepted:
2015-06-23
Online:
2016-01-01
Published:
2016-02-01
Contact:
Zhang Hanma
About author:
? These authors contributed equally to this paper
Yongshu Liang, Junjie Zhou, Wenbin Nan, Dongdong Duan, Hanma Zhang. Progress in Rice Root System Research[J]. Chinese Bulletin of Botany, 2016, 51(1): 98-106.
根系性状 | Chr.1 | Chr.2 | Chr.3 | Chr.4 | Chr.5 | Chr.6 | Chr.7 | Chr.8 | Chr.9 | Chr.10 | Chr.11 | Chr.12 | Total |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
根干重 | 15 | 12 | 13 | 10 | 12 | 11 | 7 | 5 | 12 | 0 | 18 | 10 | 125 |
根厚 | 14 | 21 | 8 | 14 | 9 | 6 | 4 | 11 | 14 | 2 | 8 | 3 | 114 |
根长 | 14 | 16 | 7 | 7 | 7 | 6 | 8 | 4 | 16 | 5 | 4 | 2 | 96 |
根数 | 17 | 10 | 9 | 6 | 4 | 7 | 9 | 4 | 4 | 4 | 5 | 2 | 81 |
总根重 | 7 | 10 | 2 | 3 | 6 | 3 | 8 | 1 | 10 | 0 | 2 | 0 | 52 |
根冠比 | 8 | 2 | 4 | 4 | 2 | 3 | 2 | 4 | 8 | 1 | 2 | 1 | 41 |
根穿透力 | 0 | 8 | 5 | 5 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 2 | 27 |
根穿透指数 | 0 | 8 | 5 | 5 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 2 | 27 |
根干重与分蘖数比 | 3 | 3 | 2 | 1 | 0 | 1 | 3 | 2 | 2 | 0 | 0 | 2 | 19 |
深层根冠比 | 3 | 6 | 1 | 2 | 1 | 0 | 1 | 0 | 1 | 0 | 3 | 0 | 18 |
根深度 | 2 | 3 | 0 | 4 | 2 | 0 | 1 | 0 | 2 | 0 | 2 | 1 | 17 |
根穿透率 | 0 | 4 | 4 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 13 |
根体积 | 0 | 4 | 3 | 0 | 4 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 13 |
根系活力 | 0 | 1 | 3 | 0 | 2 | 1 | 0 | 2 | 1 | 1 | 1 | 0 | 12 |
根拉力 | 0 | 2 | 4 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 12 |
根分枝 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
根吸收铁 | 11 | 1 | 1 | 0 | 0 | 5 | 5 | 1 | 2 | 0 | 3 | 1 | 30 |
根吸收锌 | 5 | 4 | 1 | 2 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 5 | 20 |
根吸收铝 | 5 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 2 | 11 |
根吸收锰 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
合计 | 105 | 116 | 72 | 65 | 55 | 47 | 56 | 36 | 74 | 16 | 57 | 33 | 732 |
Table 1 Distribution of QTLs associated with root morphological traits of rice on the whole genome
根系性状 | Chr.1 | Chr.2 | Chr.3 | Chr.4 | Chr.5 | Chr.6 | Chr.7 | Chr.8 | Chr.9 | Chr.10 | Chr.11 | Chr.12 | Total |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
根干重 | 15 | 12 | 13 | 10 | 12 | 11 | 7 | 5 | 12 | 0 | 18 | 10 | 125 |
根厚 | 14 | 21 | 8 | 14 | 9 | 6 | 4 | 11 | 14 | 2 | 8 | 3 | 114 |
根长 | 14 | 16 | 7 | 7 | 7 | 6 | 8 | 4 | 16 | 5 | 4 | 2 | 96 |
根数 | 17 | 10 | 9 | 6 | 4 | 7 | 9 | 4 | 4 | 4 | 5 | 2 | 81 |
总根重 | 7 | 10 | 2 | 3 | 6 | 3 | 8 | 1 | 10 | 0 | 2 | 0 | 52 |
根冠比 | 8 | 2 | 4 | 4 | 2 | 3 | 2 | 4 | 8 | 1 | 2 | 1 | 41 |
根穿透力 | 0 | 8 | 5 | 5 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 2 | 27 |
根穿透指数 | 0 | 8 | 5 | 5 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 2 | 27 |
根干重与分蘖数比 | 3 | 3 | 2 | 1 | 0 | 1 | 3 | 2 | 2 | 0 | 0 | 2 | 19 |
深层根冠比 | 3 | 6 | 1 | 2 | 1 | 0 | 1 | 0 | 1 | 0 | 3 | 0 | 18 |
根深度 | 2 | 3 | 0 | 4 | 2 | 0 | 1 | 0 | 2 | 0 | 2 | 1 | 17 |
根穿透率 | 0 | 4 | 4 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 13 |
根体积 | 0 | 4 | 3 | 0 | 4 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 13 |
根系活力 | 0 | 1 | 3 | 0 | 2 | 1 | 0 | 2 | 1 | 1 | 1 | 0 | 12 |
根拉力 | 0 | 2 | 4 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 12 |
根分枝 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
根吸收铁 | 11 | 1 | 1 | 0 | 0 | 5 | 5 | 1 | 2 | 0 | 3 | 1 | 30 |
根吸收锌 | 5 | 4 | 1 | 2 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 5 | 20 |
根吸收铝 | 5 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 2 | 11 |
根吸收锰 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
合计 | 105 | 116 | 72 | 65 | 55 | 47 | 56 | 36 | 74 | 16 | 57 | 33 | 732 |
基因 | 基因功能 | 染色体分布 | 参考文献 |
---|---|---|---|
IRT1 | 吸收Fe2+ | Chr.3 | Naimatullah et al., 2002 |
Rrl3 | 根尖分生区 | Chr.3 | Inukai et al., 2003 |
Srt5 | 短根 | Chr.5 | Yao et al., 2004 |
OsPTF1 | 吸收磷元素 | Chr.6 | Yi et al., 2005 |
SKC1 | 吸收Na+/K+ | Chr.1 | Ren et al., 2005 |
ARL1 | 不定根形成 | Chr.3 | Liu et al., 2005 |
OsGNA1 | 短根 | Chr.9 | Jiang et al., 2005 |
Lsi1 | 吸收硅离子 | Chr.2 | Ma et al., 2006 |
WOX11 | 冠根 | Chr.3 | Zhao et al., 2009 |
DEP1 | 吸收氮/直立型密穗 | Chr.9 | Huang et al., 2009; Sun et al., 2014 |
Table 2 Partial cloned genes associated with rice root traits
基因 | 基因功能 | 染色体分布 | 参考文献 |
---|---|---|---|
IRT1 | 吸收Fe2+ | Chr.3 | Naimatullah et al., 2002 |
Rrl3 | 根尖分生区 | Chr.3 | Inukai et al., 2003 |
Srt5 | 短根 | Chr.5 | Yao et al., 2004 |
OsPTF1 | 吸收磷元素 | Chr.6 | Yi et al., 2005 |
SKC1 | 吸收Na+/K+ | Chr.1 | Ren et al., 2005 |
ARL1 | 不定根形成 | Chr.3 | Liu et al., 2005 |
OsGNA1 | 短根 | Chr.9 | Jiang et al., 2005 |
Lsi1 | 吸收硅离子 | Chr.2 | Ma et al., 2006 |
WOX11 | 冠根 | Chr.3 | Zhao et al., 2009 |
DEP1 | 吸收氮/直立型密穗 | Chr.9 | Huang et al., 2009; Sun et al., 2014 |
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