太行山近期隆升促进太行花属(蔷薇科)谱系分化

doi:10.11983/CBB23159

摘要/Abstract

摘要： 太行花属(Taihangia)是分布于太行山南段的蔷薇科特有属, 含1种(太行花(T. rupestris)) 2变种(太行花原变种(T. rupestris var. rupestris)与缘毛太行花(T. rupestris var. ciliate))。然而, 这2个变种的分类地位尚存争议, 且该属的演化历史研究较欠缺。采用质体系统发生基因组学手段构建了太行花属系统发生树, 结合分化时间估算对该属起源演化时间进行推断。结果表明, 太行花属是1个获得很高支持的单系, 太行花2个变种各自形成很好的单系, 支持二者各自独立的分类地位。分化时间估算结果表明, 太行花属在上新世-更新世边界附近时期约2.6×10⁶年前开始分化, 2个变种内部谱系分支间的分化则主要发生在更新世后期。结合太行山南段在不同地质时期的隆升历史, 认为太行山南段在上新世与更新世期间的快速隆升可能很大程度地促进了太行花属不同谱系分支的分化。研究结果不仅深化了对太行花属植物演化历史的认识, 还为山体隆升促进山地类群多样性形成提供了新的研究案例。

关键词: 分化时间, 蔷薇科, 山体隆升, 太行花属, 太行山, 系统发生基因组学

Abstract: Taihangia is a monotypic genus of the Rosaceae and endemic to the southern part of Taihang Mountains. Two varieties (T. rupestris var. rupestris and T. rupestris var. ciliate) are circumscribed currently under the species T. rupestris. However, the taxonomic status of these two varieties is still controversial and very few studies on the evolutionary history of this genus. In this study, a plastid phylogenomic analysis of Taihangia was conducted and the temporal evolutionary history of the genus was investigated. The results showed that the monophyly of the genus and also the two varieties were all recovered with strong support. In addition, the genus started to diverge at ca. 2.60 million years ago (Ma) near the Pliocene-Pleistocene boundary, and diversification events within the two varieties were estimated mostly during the late Pleistocene, which is highly consistent in time scale with the recent uplift of the southern part of the Taihang Mountains that occurred during the Pliocene and Pleistocene. Thus, we propose that the uplift of the southern part of Taihang Mountains may have played an important role in triggering the lineage diversification within the genus Taihangia. The present study not only enhances our understanding on the evolutionary history of Taihangia, but also provides a case study in understanding the relationship between diversification of plant lineages and mountains uplifting occurred in Asia.

Key words: divergence times, Rosaceae, mountain uplifting, Taihangia, Taihang Mountains, phylogenomics

陈文娜, 李良涛, 周璐, 姚纲. 太行山近期隆升促进太行花属(蔷薇科)谱系分化. 植物学报, 2024, 59(5): 763-773.

Wenna Chen, Liangtao Li, Lu Zhou, Gang Yao. Recent Uplift of the Taihang Mountains Triggered the Lineage Diversification within the Genus Taihangia (Rosaceae). Chinese Bulletin of Botany, 2024, 59(5): 763-773.

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链接本文: https://www.chinbullbotany.com/CN/10.11983/CBB23159

https://www.chinbullbotany.com/CN/Y2024/V59/I5/763

图/表 4

表1 本研究新测序的太行花属取样信息

Table 1 Information of materials of Taihangia newly sequenced in the present study

Taxon/individual	Vouchers	Locality	NCBI accession number
T. rupestris var. rupestris_YGS01	Chen WN-102	Yidoushui village, Xiuwu Hsien, Henan province, China	OR795017
T. rupestris var. rupestris_YGS02	Chen WN-103	Yidoushui village, Xiuwu Hsien, Henan province, China	OR795018
T. rupestris var. ciliate_ZQG01	Chen WN-104	Zhaiqinggou village, Wu’an City, Hebei province, China	OR795020
T. rupestris var. ciliate_ZQG02	Chen WN-105	Zhaiqinggou village, Wu’an City, Hebei province, China	OR795021
T. rupestris var. ciliate_CYG	Chen WN-106	Chaoyanggou village, Wu’an City, Hebei province, China	OR795019
T. rupestris var. ciliate_FJ	Chen WN-107	Fenjiao village, Wu’an City, Hebei province, China	OR795022
T. rupestris var. ciliate_LG	Chen WN-108	Lianggou village, Wu’an City, Hebei province, China	OR795023

表2 从NCBI数据库下载的质体基因组序列信息

Table 2 Information of the plastid genomes downloaded from NCBI database

Taxon	NCBI accession number	Taxon	NCBI accession number
Acaena pinnatifida	KY419984	Rosa lichiangensis	KY419934
Comarum salesovianum	KY420034	R. persica	KY419918
Dryas drummondii	KY419952	Rubus fockeanus	KY420018
Fallugia paradoxa	KY419999	Ru. niveus	KY419961
Fragaria vesca	JF345175	Sanguisorba officinalis	KY419975
Geum aleppicum	NC_060733	Spenceria ramalana	KY419995
G. macrophyllum	NC_053765	Taihangia rupestris var. rupestris	MZ151697
G. urbanum	ON556622	T. rupestris var. rupestris	NC_037392
Hagenia abyssinica	KY420026	T. rupestris var. rupestris	MK567781
Potentilla purpurea	KY419953	T. rupestris var. ciliate	MZ151698

图1 基于83个质体基因序列采用最大似然法构建的系统发生树系统发生节点附近左侧分支上、下的数字分别表示基于贝叶斯分析所得后验概率值与最大似然法分析所得自展值。‒表示该节点未获得支持或后验概率值小于0.50或自展值小于50%。箭头示太行花属冠群节点。

Figure 1 Maximum likelihood (ML) tree inferred from the sequence matrix including 83 plastid genes Posterior probability in Bayesian inference and bootstrap value in ML analysis are indicated above and below the stem branch of each phylogenetic node, respectively. Dashes denote that the phylogenetic node associated was not supported or posterior probability <0.50 or the bootstrap value <50%. The arrowhead indicates crown node of Taihangia.

图2 基于83个质体基因构建的序列矩阵和5个时间校准点(i‒v)通过BEAST分析所得分化时间校准点i: 仙女木亚科与蔷薇亚科之间的分化节点; 校准点ii: 悬钩子族干群节点; 校准点iii: 蔷薇族干群节点; 校准点iv: 龙牙草族冠群节点; 校准点v: 路边青属与飞羽木属之间的分化节点。蓝色条块示系统发生节点分化时间95%最大后验密度区间。野外活体图为缘毛太行花。Pl.:上新世; Qu.:第四纪(含更新世与全新世); Hol.: 全新世; Ma: 百万年前

Figure 2 Divergence time obtained through BEAST analysis based on the sequence matrix of 83 plastid genes and 5 calibration points (i to v) Point i: The split between Dryadoideae and Rosoideae; Point ii: Stem node of Rubeae; Point iii: Stem node of Roseae; Point iv: Crown node of Agrimonieae; Point v: Split between Fallugia and Geum. Blue bars represent 95% highest posterior density for phylogenetic node. The field image belongs to Taihangia rupestris var. ciliate. Pl.: Pliocene; Qu.: Quaternary (Pleistocene+Holocene); Hol.: Holocene; Ma: Million years ago

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