[an error occurred while processing this directive] [an error occurred while processing this directive]
[an error occurred while processing this directive]植物中验证蛋白相互作用的Pull-down和Co-IP技术
收稿日期: 2019-08-01
录用日期: 2019-08-30
网络出版日期: 2019-09-24
基金资助
国家自然科学基金面上项目(No. 31371447);国家自然科学基金面上项目(No. 31771632)
Pull-down and Co-immunoprecipitation Assays of Interacting Proteins in Plants
Received date: 2019-08-01
Accepted date: 2019-08-30
Online published: 2019-09-24
蛋白互作在细胞生命活动中发挥关键作用, 在不同时空层面上参与多种细胞学过程, 因此研究蛋白互作对理解分子调控网络至关重要。通常情况下, 利用酵母双杂交系统筛选植物蛋白互作必须通过体外和体内系统进行验证。Pull-down和Co-IP是验证植物蛋白互作的常用技术。Pull-down被广泛用于体外验证蛋白间的直接互作; 而在植物活体内, 利用本氏烟草(Nicotiana benthamiana)叶片瞬时表达蛋白, 继而通过Co-IP进行鉴定是目前验证蛋白互作最简单且最有效的方法之一。该文对GST Pull-down和烟草瞬时表达系统中Co-IP技术原理及实验方案进行详细描述, 以期为验证植物蛋白互作提供参考。
徐重益 . 植物中验证蛋白相互作用的Pull-down和Co-IP技术[J]. 植物学报, 2020 , 55(1) : 62 -68 . DOI: 10.11983/CBB19143
Protein-protein interactions play a key role in cellular signaling, involved in various biological processes. Studies on these interactions are therefore crucial toward understanding the regulatory networks of cellular signaling. It is a standard practice that the protein-protein interactions identified by the yeast two-hybrid system should be independently confirmed by in vitro and in vivo approaches. Pull-down and co-immunoprecipitation (Co-IP) are routine approaches to detect protein-protein interactions. Pull-down assay is used to detect direct or physical interactions between proteins in vitro. In plant biology studies, one of the most convenient methods to detect protein-protein interactions is the transient expression of the target proteins in Nicotiana benthamiana leaves followed by the Co-IP assay. In this paper, we describe the principles and protocols for the GST tag-based pull-down assay and the Co-IP assay of proteins transiently expressed in N. benthamiana leaves, providing a reference for detecting plant protein-protein interactions.
Key words: plants; protein-protein interactions; Pull-down; Co-immunoprecipitation
[1] | Fernández-Bautista N, Fernández-Calvino L, Mu?oz A, Castellano MM (2017). HOP3, a member of the HOP family in Arabidopsis, interacts with BiP and plays a major role in the ER stress response. Plant Cell Environ 40, 1341-1355. |
[2] | Hirsch S, Kim J, Mu?oz A, Heckmann AB, Downie JA, Oldroyd GED (2009). GRAS proteins form a DNA binding complex to induce gene expression during nodulation signaling in Medicago truncatula. Plant Cell 21, 545-557. |
[3] | Mu?oz A, Mangano S, González-García MP, Contreras R, Sauer M, De Rybel B, Weijers D, Sánchez-Serrano JJ, Sanmartin M, Rojo E (2017). RIMA-dependent nuclear accumulation of IYO triggers auxin-irreversible cell differentiation in Arabidopsis. Plant Cell 29, 575-588. |
[4] | Smith DB, Johnson KS (1988). Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase. Gene 67, 31-40. |
[5] | Stasi M, De Luca M, Bucci C (2015). Two-hybrid-based systems: powerful tools for investigation of membrane traffic machineries. J Biotechnol 202, 105-117. |
[6] | Takahashi Y (2015). Co-immunoprecipitation from transfected cells. In: Meyerkord CL, Fu HA, eds. Protein-Protein Interactions. York: Humana Press.pp. 381-389. |
[7] | Wissmueller S, Font J, Liew CW, Cram E, Schroeder T, Turner J, Crossley M, Mackay JP, Matthews JM (2011). Protein-protein interactions: analysis of a false positive GST pulldown result. Proteins 79, 2365-2371. |
/
〈 | 〉 |