Transcriptional Regulatory Network of Secondary Cell Wall Biosynthesis in Plants
Received date: 2019-07-15
Accepted date: 2020-03-23
Online published: 2020-03-23
Plant secondary cell walls (SCWs) contain cellulose, hemicellulose and lignin, which endow the cell walls with mechanical strength and hydrophobicity. This characteristic is very important for plant upright growth, water and nutrient transport, and resistance to biotic and abiotic stresses. In this review, we summarize the transcription factors regulating SCW biosynthesis and their regulatory mechanisms, including NAC transcription factors functioning as first-layer master switch, the AtMYB46/AtMYB83 and their downstream regulators serving as secondary-layer master switch, as well as the other transcription factors involved in the regulation of biosynthesis of the SCW. The future research contents and methods are also prospected in order to provide reference for further research on the transcriptional regulatory network of SCW biosynthesis.
Yu Zhang, Mingjie Zhao, Wei Zhang . Transcriptional Regulatory Network of Secondary Cell Wall Biosynthesis in Plants[J]. Chinese Bulletin of Botany, 2020 , 55(3) : 351 -368 . DOI: 10.11983/CBB19135
| [1] | 李慧, 刘凤栾, 郗琳, 高彬, 严珊, 王玲, 马男, 赵梁军, 杨春起 (2012). 月季皮刺的组织结构与化学组成. 园艺学报 39, 1321-1329. |
| [2] | Aida M, Ishida T, Fukaki H, Fujisawa H, Tasaka M (1997). Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant. Plant Cell 9, 841-857. |
| [3] | Asano G, Kubo R, Tanimoto S (2008). Growth, structure and lignin localization in rose prickle. Bull Fac Agric Saga Univ (93), 117-125. |
| [4] | Baima S, Possenti M, Matteucci A, Wisman E, Altamura MM, Ruberti I, Morelli G (2001). The Arabidopsis ATHB- 8 HD-zip protein acts as a differentiation-promoting transcription factor of the vascular meristems. Plant Physiol 126, 643-655. |
| [5] | Bennett T, van den Toorn A, Sanchez-Perez GF, Campilho A, Willemsen V, Snel B, Scheres B (2012). SOMBRERO, BEARSKIN1, and BEARSKIN2 regulate root cap maturation in Arabidopsis. Plant Cell 22, 640-654. |
| [6] | Bhargava A, Ahad A, Wang SC, Mansfield SD, Haughn GW, Douglas CJ, Ellis BE (2013). The interacting MYB75 and KNAT7 transcription factors modulate secondary cell wall deposition both in stems and seed coat in Arabidopsis. Planta 237, 1199-1211. |
| [7] | Bhargava A, Mansfield SD, Hall HC, Douglas CJ, Ellis BE (2010). MYB75 functions in regulation of secondary cell wall formation in the Arabidopsis inflorescence stem. Plant Physiol 154, 1428-1438. |
| [8] | Bomal C, Bedon F, Caron S, Mansfield SD, Levasseur C, Cooke JEK, Blais S, Tremblay L, Morency M, Pavy N, Grima-Pettenati J, Séguin A, MacKay J (2008). Involvement of Pinus taeda MYB1 and MYB8 in phenylpropanoid metabolism and secondary cell wall biogenesis: a comparative in planta analysis. J Exp Bot 59, 3925-3939. |
| [9] | Borevitz JO, Xia YJ, Blount J, Dixon RA, Lamb C (2000). Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis. Plant Cell 12, 2383-2393. |
| [10] | Brown DM, Zeef LAH, Ellis J, Goodacre R, Turner SR (2005). Identification of novel genes in Arabidopsis involved in secondary cell wall formation using expression profiling and reverse genetics. Plant Cell 17, 2281-2295. |
| [11] | Cassan-Wang H, Goué N, Saidi MN, Legay S, Sivadon P, Goffner D, Grima-Pettenati J (2013). Identification of novel transcription factors regulating secondary cell wall formation in Arabidopsis. Front Plant Sci 4, 189. |
| [12] | Chai GH, Qi G, Cao YP, Wang ZG, Yu L, Tang XF, Yu YC, Wang D, Kong YZ, Zhou GK (2014). Poplar PdC3H17 and PdC3H18 are direct targets of PdMYB3 and PdMYB21, and positively regulate secondary wall formation in Arabidopsis and poplar. New Phytol 203, 520-534. |
| [13] | Christianson JA, Dennis ES, Llewellyn DJ, Wilson IW (2010). ATAF NAC transcription factors: regulators of plant stress signaling. Plant Signal Behav 5, 428-432. |
| [14] | Cosgrove DJ, Jarvis MC (2012). Comparative structure and biomechanics of plant primary and secondary cell walls. Front Plant Sci 3, 204. |
| [15] | Dawson J, S?zen E, Vizir I, Waeyenberge SV, Wilson ZA, Mulligan BJ (1999). Characterization and genetic mapping of a mutation (ms35) which prevents anther dehiscence in Arabidopsis thaliana by affecting secondary wall thickening in the endothecium. New Phytol 144, 213-222. |
| [16] | Demura T, Tashiro G, Horiguchi G, Kishimoto N, Kubo M, Matsuoka N, Minami A, Nagata-Hiwatashi M, Nakamura K, Okamura Y, Sassa N, Suzuki S, Yazaki J, Kikuchi S, Fukuda H (2002). Visualization by comprehensive microarray analysis of gene expression programs during transdifferentiation of mesophyll cells into xylem cells. Proc Natl Acad Sci USA 99, 15794-15799. |
| [17] | Doblin MS, Kurek I, Jacob-Wilk D, Delmer DP (2002). Cellulose biosynthesis in plants: from genes to rosettes. Plant Cell Physiol 43, 1407-1420. |
| [18] | Du Q, Avci U, Li SB, Gallego-Giraldo L, Pattathil S, Qi LY, Hahn MG, Wang HZ (2015). Activation of miR165b represses AtHB15 expression and induces pith secondary wall development in Arabidopsis. Plant J 83, 388-400. |
| [19] | Du Q, Wang HZ (2015). The role of HD-ZIP III transcription factors and miR165/166 in vascular development and secondary cell wall formation. Plant Signal Behav 10, e1078955. |
| [20] | Endo H, Yamaguchi M, Tamura T, Nakano Y, Nishikubo N, Yoneda A, Kato K, Kubo M, Kajita S, Katayama Y, Ohtani M, Demura T (2015). Multiple classes of transcription factors regulate the expression of VASCULAR- RELATED NAC-DOMAIN 7, a master switch of xylem vessel differentiation. Plant Cell Physiol 56, 242-254. |
| [21] | Ernst HA, Olsen AN, Skriver K, Larsen S, Lo Leggio L (2004). Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors. EMBO Rep 5, 297-303. |
| [22] | Fukuda H (2004). Signals that control plant vascular cell differentiation. Nat Rev Mol Cell Biol 5, 379-391. |
| [23] | Gallego-Giraldo L, Shadle G, Shen H, Barros-Rios J, Corrales SF, Wang HZ, Dixon RA (2016). Combining enhanced biomass density with reduced lignin level for improved forage quality. Plant Biotechnol J 14, 895-904. |
| [24] | Goubet F, Barton CJ, Mortimer JC, Yu XL, Zhang ZN, Miles GP, Richens J, Liepman AH, Seffen K, Dupree P (2009). Cell wall glucomannan in Arabidopsis is synthesised by CSLA glycosyltransferases, and influences the progression of embryogenesis. Plant J 60, 527-538. |
| [25] | Grant EH, Fujino T, Beers EP, Brunner AM (2010). Characterization of NAC domain transcription factors implicated in control of vascular cell differentiation in Arabidopsis and Populus. Planta 232, 337-352. |
| [26] | Guo Y, Cai Z, Gan S (2004). Transcriptome of Arabidopsis leaf senescence. Plant Cell Environ 27, 521-549. |
| [27] | Handakumbura PP, Hazen SP (2012). Transcriptional regulation of grass secondary cell wall biosynthesis: playing catch-up with Arabidopsis thaliana. Front Plant Sci 3, 74. |
| [28] | Hao YJ, Song QX, Chen HW, Zou HF, Wei W, Kang XS, Ma B, Zhang WK, Zhang JS, Chen SY (2010). Plant NAC-type transcription factor proteins contain a NARD domain for repression of transcriptional activation. Planta 232, 1033-1043. |
| [29] | He JB, Zhao XH, Du PZ, Zeng W, Beahan CT, Wang YQ, Li HL, Bacic A, Wu AM (2018). KNAT7 positively regulates xylan biosynthesis by directly activating IRX9 expression in Arabidopsis. J Integr Plant Biol 60, 514-528. |
| [30] | Huang DB, Wang SG, Zhang BC, Shangguan KK, Shi YY, Zhang DM, Liu XL, Wu K, Xu ZP, Fu XD, Zhou YH (2015). A gibberellin-mediated DELLA-NAC signaling cascade regulates cellulose synthesis in rice. Plant Cell 27, 1681-1696. |
| [31] | Hussey SG, Mizrachi E, Spokevicius AV, Bossinger G, Berger DK, Myburg AA (2011). SND2, a NAC transcription factor gene, regulates genes involved in secondary cell wall development in Arabidopsis fibres and increases fibre cell area in Eucalyptus. BMC Plant Biol 11, 173. |
| [32] | Itoh JI, Hibara KI, Sato Y, Nagato Y (2008). Developmental role and auxin responsiveness of class III homeodomain leucine zipper gene family members in rice. Plant Physiol 147, 1960-1975. |
| [33] | Jin HL, Cominelli E, Bailey P, Parr A, Mehrtens F, Jones J, Tonelli C, Weisshaar B, Martin C (2000). Transcriptional repression by AtMYB4 controls production of UV- protecting sunscreens in Arabidopsis. EMBO J 19, 6150-6161. |
| [34] | Kim J, Jung JH, Reyes JL, Kim YS, Kim SY, Chung KS, Kim JA, Lee M, Lee Y, Kim VN, Chua NH, Park CM (2005). MicroRNA-directed cleavage of ATHB15 mRNA regulates vascular development in Arabidopsis inflorescence stems. Plant J 42, 84-94. |
| [35] | Kim WC, Kim JY, Ko JH, Kang H, Han KH (2014a). Identification of direct targets of transcription factor MYB46 provides insights into the transcriptional regulation of secondary wall biosynthesis. Plant Mol Biol 85, 589-599. |
| [36] | Kim WC, Kim JY, Ko JH, Kang H, Kim J, Han KH (2014b). AtC3H14, a plant-specific tandem CCCH zinc-finger protein, binds to its target mRNAs in a sequence-specific manner and affects cell elongation in Arabidopsis thaliana. Plant J 80, 772-784. |
| [37] | Kim WC, Kim JY, Ko JH, Kim J, Han KH (2013a). Transcription factor MYB46 is an obligate component of the transcriptional regulatory complex for functional expression of secondary wall-associated cellulose synthases in Arabidopsis thaliana. J Plant Physiol 170, 1374-1378. |
| [38] | Kim WC, Ko JH, Han KH (2012). Identification of a cis- acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis. Plant Mol Biol 78, 489-501. |
| [39] | Kim WC, Ko JH, Kim JY, Kim J, Bae HJ, Han KH (2013b). MYB46 directly regulates the gene expression of secondary wall-associated cellulose synthases in Arabidopsis. Plant J 73, 26-36. |
| [40] | Kim WC, Reca IB, Kim Y, Park S, Thomashow MF, Keegstra K, Han KH (2014c). Transcription factors that directly regulate the expression of CSLA9 encoding mannan synthase in Arabidopsis thaliana. Plant Mol Biol 84, 577-587. |
| [41] | Ko JH, Jeon HW, Kim WC, Kim JY, Han KH (2014). The MYB46/MYB83-mediated transcriptional regulatory programme is a gatekeeper of secondary wall biosynthesis. Ann Bot 114, 1099-1107. |
| [42] | Ko JH, Kim WC, Han KH (2009). Ectopic expression of MYB46 identifies transcriptional regulatory genes involved in secondary wall biosynthesis in Arabidopsis. Plant J 60, 649-665. |
| [43] | Ko JH, Kim WC, Kim JY, Ahn SJ, Han KH (2012). MYB46-mediated transcriptional regulation of secondary wall biosynthesis. Mol Plant 5, 961-963. |
| [44] | Ko JH, Yang SH, Park AH, Lerouxel O, Han KH (2007). ANAC012, a member of the plant-specific NAC transcription factor family, negatively regulates xylary fiber development in Arabidopsis thaliana. Plant J 50, 1035-1048. |
| [45] | Kubo M, Udagawa M, Nishikubo N, Horiguchi G, Yamaguchi M, Ito J, Mimura T, Fukuda H, Demura T (2005). Transcription switches for protoxylem and metaxylem vessel formation. Genes Dev 19, 1855-1860. |
| [46] | Li EY, Bhargava A, Qiang WY, Friedmann MC, Forneris N, Savidge RA, Johnson LA, Mansfield SD, Ellis BE, Douglas CJ (2012). The Class II KNOX gene KNAT7 negatively regulates secondary wall formation in Arabidopsis and is functionally conserved in Populus. New Phytol 194, 102-115. |
| [47] | Li EY, Wang SC, Liu YY, Chen JG, Douglas CJ (2011). OVATE FAMILY PROTEIN 4 (OFP4) interaction with KNAT7 regulates secondary cell wall formation in Arabidopsis thaliana. Plant J 67, 328-341. |
| [48] | Li W, Huang GQ, Zhou W, Xia XC, Li DD, Li XB (2014). A cotton (Gossypium hirsutum) gene encoding a NAC transcription factor is involved in negative regulation of plant xylem development. Plant Physiol Biochem 83, 134-141. |
| [49] | Liepman AH, Wilkerson CG, Keegstra K (2005). Expression of cellulose synthase-like (Csl) genes in insect cells reveals that CslA family members encode mannan synthases. Proc Natl Acad Sci USA 102, 2221-2226. |
| [50] | Liu JY, Osbourn A, Ma PD (2015a). MYB transcription factors as regulators of phenylpropanoid metabolism in plants. Mol Plant 8, 689-708. |
| [51] | Liu YY, Douglas CJ (2015). A role for OVATE FAMILY PROTEIN 1 (OFP1) and OFP4 in a BLH6-KNAT7 multi- protein complex regulating secondary cell wall formation in Arabidopsis thaliana. Plant Signal Behav 10, e1033126. |
| [52] | Liu YY, You SJ, Taylor-Teeples M, Li WL, Schuetz M, Brady SM, Douglas CJ (2015b). BEL1-LIKE HOMEODOMAIN6 and KNOTTED ARABIDOPSIS THALIANA7 interact and regulate secondary cell wall formation via repression of REVOLUTA. Plant Cell 26, 4843-4861. |
| [53] | Mallory AC, Reinhart BJ, Jones-Rhoades MW, Tang GL, Zamore PD, Barton MK, Bartel DP (2004). MicroRNA control of PHABULOSA in leaf development: importance of pairing to the microRNA 5' region. EMBO J 23, 3356-3364. |
| [54] | McCarthy RL, Zhong RQ, Fowler S, Lyskowski D, Piyasena H, Carleton K, Spicer C, Ye ZH (2010). The poplar MYB transcription factors, PtrMYB3 and PtrMYB20, are involved in the regulation of secondary wall biosynthesis. Plant Cell Physiol 51, 1084-1090. |
| [55] | McCarthy RL, Zhong RQ, Ye ZH (2009). MYB83 is a direct target of SND1 and acts redundantly with MYB46 in the regulation of secondary cell wall biosynthesis in Arabidopsis. Plant Cell Physiol 50, 1950-1964. |
| [56] | McCarthy RL, Zhong RQ, Ye ZH (2011). Secondary wall NAC binding element (SNBE), a key cis-acting element required for target gene activation by secondary wall NAC master switches. Plant Signal Behav 6, 1282-1285. |
| [57] | Mitsuda N, Iwase A, Yamamoto H, Yoshida M, Seki M, Shinozaki K, Ohme-Takagi M (2007). NAC transcription factors, NST1 and NST3, are key regulators of the formation of secondary walls in woody tissues of Arabidopsis. Plant Cell 19, 270-280. |
| [58] | Mitsuda N, Ohme-Takagi M (2008). NAC transcription factors NST1 and NST3 regulate pod shattering in a partially redundant manner by promoting secondary wall formation after the establishment of tissue identity. Plant J 56, 768-778. |
| [59] | Mitsuda N, Seki M, Shinozaki K, Ohme-Takagi M (2005). The NAC transcription factors NST1 and NST2 of Arabidopsis regulate secondary wall thickenings and are required for anther dehiscence. Plant Cell 17, 2993-3006. |
| [60] | Mosier N, Wyman C, Dale B, Elander R, Lee YY, Holtzapple M, Ladisch M (2005). Features of promising technologies for pretreatment of lignocellulosic biomass. Bioresour Technol 96, 673-686. |
| [61] | Nakano Y, Nishikubo N, Goué N, Ohtani M, Yamaguchi M, Katayama Y, Demura T (2010). MYB transcription factors orchestrating the developmental program of xylem vessels in Arabidopsis roots. Plant Biotechnol 27, 267-272. |
| [62] | Nakano Y, Yamaguchi M, Endo H, Rejab NA, Ohtani M (2015). NAC-MYB-based transcriptional regulation of secondary cell wall biosynthesis in land plants. Front Plant Sci 6, 288. |
| [63] | Nakashima K, Takasaki H, Mizoi J, Shinozaki K, Yamaguchi-Shinozaki K (2012). NAC transcription factors in plant abiotic stress responses. Biochim Biophys Acta (BBA)- Gene Regul Mech 1819, 97-103. |
| [64] | Ohashi-Ito K, Fukuda H (2003). HD-ZIP III homeobox genes that include a novel member, ZeHB-13 (Zinnia)/ATHB-15 (Arabidopsis), are involved in procambium and xylem cell differentiation. Plant Cell Physiol 44, 1350-1358. |
| [65] | Ohashi-Ito K, Kubo M, Demura T, Fukuda H (2005). Class III homeodomain leucine-zipper proteins regulate xylem cell differentiation. Plant Cell Physiol 46, 1646-1656. |
| [66] | Ohashi-Ito K, Oda Y, Fukuda H (2010). Arabidopsis VASCULAR-RELATED NAC-DOMAIN6 directly regulates the genes that govern programmed cell death and secondary wall formation during xylem differentiation. Plant Cell 22, 3461-3473. |
| [67] | ?hman D, Demedts B, Kumar M, Gerber L, Gorzsás A, Goeminne G, Hedenstr?m M, Ellis B, Boerjan W, Sundberg B (2013). MYB103 is required for FERULATE- 5-HYDROXYLASE expression and syringyl lignin biosynthesis in Arabidopsis stems. Plant J 73, 63-76. |
| [68] | Ohtani M, Nishikubo N, Xu B, Yamaguchi M, Mitsuda N, Goué N, Shi FS, Ohme-Takagi M, Demura T (2011). A NAC domain protein family contributing to the regulation of wood formation in poplar. Plant J 67, 499-512. |
| [69] | Olsen AN, Ernst HA, Leggio LL, Skriver K (2005). NAC transcription factors: structurally distinct, functionally diverse. Trends Plant Sci 10, 79-87. |
| [70] | Ooka H, Satoh K, Doi K, Nagata T, Otomo Y, Murakami K, Matsubara K, Osato N, Kawai J, Carninci P, Hayashizaki Y, Suzuki K, Kojima K, Takahara Y, Yamamoto K, Kikuchi S (2003). Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DNA Res 10, 239-247. |
| [71] | Preston J, Wheeler J, Heazlewood J, Li SF, Parish RW (2004). AtMYB32 is required for normal pollen development in Arabidopsis thaliana. Plant J 40, 979-995. |
| [72] | Puranik S, Sahu PP, Srivastava PS, Prasad M (2012). NAC proteins: regulation and role in stress tolerance. Trends Plant Sci 17, 369-381. |
| [73] | Pyo H, Demura T, Fukuda H (2007). TERE; a novel cis- element responsible for a coordinated expression of genes related to programmed cell death and secondary wall formation during differentiation of tracheary elements. Plant J 51, 955-965. |
| [74] | Rao X, Dixon RA (2018). Current models for transcriptional regulation of secondary cell wall biosynthesis in grasses. Front Plant Sci 9, 399. |
| [75] | Romano JM, Dubos C, Prouse MB, Wilkins O, Hong H, Poole M, Kang KY, Li EY, Douglas CJ, Western TL, Mansfield SD, Campbell MM (2012). AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network. New Phytol 195, 774-786. |
| [76] | Sakamoto S, Mitsuda N (2014). Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant. Plant Cell Physiol 56, 299-310. |
| [77] | Sakamoto S, Takata N, Oshima Y, Yoshida K, Taniguchi T, Mitsuda N (2016). Wood reinforcement of poplar by rice NAC transcription factor. Sci Rep 6, 19925. |
| [78] | Shao HB, Wang HY, Tang XL (2015). NAC transcription factors in plant multiple abiotic stress responses: progress and prospects. Front Plant Sci 6, 902. |
| [79] | Souer E, Van Houwelingen A, Kloos D, Mol J, Koes R (1996). The no apical meristem gene of petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries. Cell 85, 159-170. |
| [80] | Soyano T, Thitamadee S, Machida Y, Chua NH (2008). ASYMMETRIC LEAVES2-LIKE19/LATERAL ORGAN BOUNDARIES DOMAIN30 and ASL20/LBD18 regulate tracheary element differentiation in Arabidopsis. Plant Cell 20, 3359-3373. |
| [81] | Steiner-Lange S, Unte US, Eckstein L, Yang CY, Wilson ZA, Schmelzer E, Dekker K, Saedler H (2003). Disruption of Arabidopsis thaliana MYB26 results in male sterility due to non-dehiscent anthers. Plant J 34, 519-528. |
| [82] | Takata N, Awano T, Nakata MT, Sano Y, Sakamoto S, Mitsuda N, Taniguchi T (2019). Populus NST/SND orthologs are key regulators of secondary cell wall formation in wood fibers, phloem fibers and xylem ray parenchyma cells. Tree Physiol 39, 514-525. |
| [83] | Takata N, Sakamoto S, Mitsuda N, Taniguchi T (2017). The Arabidopsis NST3/SND1 promoter is active in secondary woody tissue in poplar. J Wood Sci 63, 396-400. |
| [84] | Tan TT, Endo H, Sano R, Kurata T, Yamaguchi M, Ohtani M, Demura T (2018). Transcription factors VND1-VND3 contribute to cotyledon xylem vessel formation. Plant Physiol 176, 773-789. |
| [85] | Tang N, Shahzad Z, Lonjon F, Loudet O, Vailleau F, Maurel C (2018). Natural variation at XND1 impacts root hydraulics and trade-off for stress responses in Arabidopsis. Nat Commun 9, 3884. |
| [86] | Tang XF, Zhuang YM, Qi G, Wang D, Liu HH, Wang KR, Chai GH, Zhou GK (2015). Poplar PdMYB221 is involved in the direct and indirect regulation of secondary wall biosynthesis during wood formation. Sci Rep 5, 12240. |
| [87] | Taylor NG, Howells RM, Huttly AK, Vickers K, Turner SR (2003). Interactions among three distinct CesA proteins essential for cellulose synthesis. Proc Natl Acad Sci USA 100, 1450-1455. |
| [88] | Taylor NG, Laurie S, Turner SR (2000). Multiple cellulose synthase catalytic subunits are required for cellulose synthesis in Arabidopsis. Plant Cell 12, 2529-2539. |
| [89] | Taylor NG, Scheible WR, Cutler S, Somerville CR, Turner SR (1999). The irregular xylem3 locus of Arabidopsis encodes a cellulose synthase required for secondary cell wall synthesis. Plant Cell 11, 769-779. |
| [90] | Taylor-Teeples M, Lin L, de Lucas M, Turco G, Toal TW, Gaudinier A, Young NF, Trabucco GM, Veling MT, Lamothe R, Handakumbura PP, Xiong G, Wang C, Corwin J, Tsoukalas A, Zhang L, Ware D, Pauly M, Kliebenstein DJ, Dehesh K, Tagkopoulos I, Breton G, Pruneda-Paz JL, Ahnert SE, Kay SA, Hazen SP, Brady SM (2015). An Arabidopsis gene regulatory network for secondary cell wall synthesis. Nature 517, 571-575. |
| [91] | Tran LS, Nishiyama R, Yamaguchi-Shinozaki K, Shinozaki K (2010). Potential utilization of NAC transcription factors to enhance abiotic stress tolerance in plants by biotechnological approach. GM Crops 1, 32-39. |
| [92] | Wang HZ, Avci U, Nakashima J, Hahn MG, Chen F, Dixon RA (2010). Mutation of WRKY transcription factors initiates pith secondary wall formation and increases stem biomass in dicotyledonous plants. Proc Natl Acad Sci USA 107, 22338-22343. |
| [93] | Wang HZ, Dixon RA (2012). On-off switches for secondary cell wall biosynthesis. Mol Plant 5, 297-303. |
| [94] | Wang LJ, Lu WX, Ran LY, Dou LW, Yao S, Hu J, Fan D, Li CF, Luo KM (2019). R2R3-MYB transcription factor MYB6 promotes anthocyanin and proanthocyanidin biosynthesis but inhibits secondary cell wall formation in Populus tomentosa. Plant J 99, 733-751. |
| [95] | Welner DH, Lindemose S, Grossmann JG, M?llegaard NE, Olsen AN, Helgstrand C, Skriver K, Leggio LL (2012). DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. Biochem J 444, 395-404. |
| [96] | Willemsen V, Bauch M, Bennett T, Campilho A, Wolkenfelt H, Xu J, Haseloff J, Scheres B (2008). The NAC domain transcription factors FEZ and SOMBRERO control the orientation of cell division plane in Arabidopsis root stem cells. Dev Cell 15, 913-922. |
| [97] | Williams L, Grigg SP, Xie MT, Christensen S, Fletcher JC (2005). Regulation of Arabidopsis shoot apical meristem and lateral organ formation by microRNA miR166g and its AtHD-ZIP target genes. Development 132, 3657-3668. |
| [98] | Williamson RE, Burn JE, Hocart CH (2002). Towards the mechanism of cellulose synthesis. Trends Plant Sci 7, 461-467. |
| [99] | Xu B, Ohtani M, Yamaguchi M, Toyooka K, Wakazaki M, Sato M, Kubo M, Nakano Y, Sano R, Hiwatashi Y, Murata T, Kurata T, Yoneda A, Kato K, Hasebe M, Demura T (2014). Contribution of NAC transcription factors to plant adaptation to land. Science 343, 1505-1508. |
| [100] | Yamaguchi M, Demura T (2010). Transcriptional regulation of secondary wall formation controlled by NAC domain proteins. Plant Biotechnol 27, 237-242. |
| [101] | Yamaguchi M, Kubo M, Fukuda H, Demura T (2008). VASCULAR-RELATED NAC-DOMAIN 7 is involved in the differentiation of all types of xylem vessels in Arabidopsis roots and shoots. Plant J 55, 652-664. |
| [102] | Yamaguchi M, Mitsuda N, Ohtani M, Ohme-Takagi M, Kato K, Demura T (2011). VASCULAR-RELATED NAC- DOMAIN 7 directly regulates the expression of a broad range of genes for xylem vessel formation. Plant J 66, 579-590. |
| [103] | Yamaguchi M, Nagahage ISP, Ohtani M, Ishikawa T, Uchimiya H, Kawai-Yamada M, Demura T (2015). Arabidopsis NAC domain proteins VND-INTERACTING1 and ANAC103 interact with multiple NAC domain proteins. Plant Biotechnol 32, 119-123. |
| [104] | Yamaguchi M, Ohtani M, Mitsuda N, Kubo M, Ohme- Takagi M, Fukuda H, Demura T (2010c). VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis. Plant Cell 22, 1249-1263. |
| [105] | Yan L, Xu CH, Kang YL, Gu TW, Wang DX, Zhao SY, Xia GM (2013). The heterologous expression in Arabidopsis thaliana of sorghum transcription factor SbbHLH1 downregulates lignin synthesis. J Exp Bot 64, 3021-3032. |
| [106] | Yang CY, Xu ZY, Song J, Conner K, Barrena GV, Wilson ZA (2007). Arabidopsis MYB26/MALESTERILE35 regulates secondary thickening in the endothecium and is essential for anther dehiscence. Plant Cell 19, 534-548. |
| [107] | Yang JH, Wang HZ (2016). Molecular mechanisms for vascular development and secondary cell wall formation. Front Plant Sci 7, 356. |
| [108] | Yang SD, Seo PJ, Yoon HK, Park CM (2011). The Arabidopsis NAC transcription factor VNI2 integrates abscisic acid signals into leaf senescence via the COR/RD genes. Plant Cell 23, 2155-2168. |
| [109] | Ye YF, Wu K, Chen JF, Liu Q, Wu YJ, Liu BM, Fu XD (2018). OsSND2, a NAC family transcription factor, is involved in secondary cell wall biosynthesis through regulating MYBs expression in rice. Rice 11, 36. |
| [110] | Zhang DM, Xu ZP, Cao SX, Chen KL, Li SC, Liu XL, Gao CX, Zhang BC, Zhou YH (2018a). An uncanonical CCCH-tandem zinc-finger protein represses secondary wall synthesis and controls mechanical strength in rice. Mol Plant 11, 163-174. |
| [111] | Zhang J, Huang GQ, Zou D, Yan JQ, Li Y, Hu S, Li XB (2018b). The cotton (Gossypium hirsutum) NAC transcription factor (FSN1) as a positive regulator participates in controlling secondary cell wall biosynthesis and modification of fibers. New Phytol 217, 625-640. |
| [112] | Zhang J, Xie M, Tuskan GA, Muchero W, Chen JG (2018c). Recent advances in the transcriptional regulation of secondary cell wall biosynthesis in the woody plants. Front Plant Sci 9, 1535. |
| [113] | Zhang Q, Xie Z, Zhang R, Xu P, Liu HT, Yang HQ, Doblin MS, Bacic A, Li LG (2018d). Blue light regulates secondary cell wall thickening via MYC2/MYC4 activation of the NST1-directed transcriptional network in Arabidopsis. Plant Cell 30, 2512-2528. |
| [114] | Zhao CS, Avci U, Grant EH, Haigler CH, Beers EP (2008). XND1, a member of the NAC domain family in Arabidopsis thaliana, negatively regulates lignocellulose synthesis and programmed cell death in xylem. Plant J 53, 425-436. |
| [115] | Zhao CS, Craig JC, Petzold HE, Dickerman AW, Beers EP (2005). The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl. Plant Physiol 138, 803-818. |
| [116] | Zhao CS, Lasses T, Bako L, Kong DY, Zhao BY, Chanda B, Bombarely A, Cruz-Ramírez A, Scheres B, Brunner AM, Beers EP (2017). XYLEM NAC DOMAIN 1, an angiosperm NAC transcription factor, inhibits xylem differentiation through conserved motifs that interact with RETINOBLASTOMA-RELATED. New Phytol 216, 76-89. |
| [117] | Zhao KM, Bartley LE (2014). Comparative genomic analysis of the R2R3 MYB secondary cell wall regulators of Arabidopsis, poplar, rice, maize, and switchgrass. BMC Plant Biol 14, 135. |
| [118] | Zhao YQ, Song XQ, Zhou HJ, Wei KL, Jiang C, Wang JN, Cao Y, Tang F, Zhao ST, Lu MZ (2020). KNAT2/6b, a class I KNOX gene, impedes xylem differentiation by regulating NAC domain transcription factors in poplar. New Phytol 225, 1531-1544. |
| [119] | Zhong RQ, Demura T, Ye ZH (2006). SND1, a NAC domain transcription factor, is a key regulator of secondary wall synthesis in fibers of Arabidopsis. Plant Cell 18, 3158-3170. |
| [120] | Zhong RQ, Lee C, McCarthy RL, Reeves CK, Jones EG, Ye ZH (2011). Transcriptional activation of secondary wall biosynthesis by rice and maize NAC and MYB transcription factors. Plant Cell Physiol 52, 1856-1871. |
| [121] | Zhong RQ, Lee C, Ye ZH (2010a). Functional characterization of poplar wood-associated NAC domain transcription factors. Plant Physiol 152, 1044-1055. |
| [122] | Zhong RQ, Lee C, Ye ZH (2010b). Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Mol Plant 3, 1087-1103. |
| [123] | Zhong RQ, Lee C, Ye ZH (2010c). Evolutionary conservation of the transcriptional network regulating secondary cell wall biosynthesis. Trends Plant Sci 15, 625-632. |
| [124] | Zhong RQ, Lee C, Zhou JL, McCarthy RL, Ye ZH (2008). A battery of transcription factors involved in the regulation of secondary cell wall biosynthesis in Arabidopsis. Plant Cell 20, 2763-2782. |
| [125] | Zhong RQ, McCarthy RL, Haghighat M, Ye ZH (2013). The poplar MYB master switches bind to the SMRE site and activate the secondary wall biosynthetic program during wood formation. PLoS One 8, e69219. |
| [126] | Zhong RQ, Richardson EA, Ye ZH (2007a). Two NAC domain transcription factors, SND1 and NST1, function redundantly in regulation of secondary wall synthesis in fibers of Arabidopsis. Planta 225, 1603-1611. |
| [127] | Zhong RQ, Richardson EA, Ye ZH (2007b). The MYB46 transcription factor is a direct target of SND1 and regulates secondary wall biosynthesis in Arabidopsis. Plant Cell 19, 2776-2792. |
| [128] | Zhong RQ, Ye ZH (2012). MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53, 368-380. |
| [129] | Zhong RQ, Ye ZH (2014). Secondary cell walls: biosynthesis, patterned deposition and transcriptional regulation. Plant Cell Physiol 56, 195-214. |
| [130] | Zhong RQ, Ye ZH (2015). The Arabidopsis NAC transcription factor NST2 functions together with SND1 and NST1 to regulate secondary wall biosynthesis in fibers of inflorescence stems. Plant Signal Behav 10, e989746. |
| [131] | Zhong RQ, Yuan YX, Spiekerman JJ, Guley JT, Egbosiuba JC, Ye ZH (2015). Functional characterization of NAC and MYB transcription factors involved in regulation of biomass production in Switchgrass (Panicum virgatum). PLoS One 10, e0134611. |
| [132] | Zhou JL, Lee C, Zhong RQ, Ye ZH (2009). MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis. Plant Cell 21, 248-266. |
| [133] | Zhou JL, Zhong RQ, Ye ZH (2014). Arabidopsis NAC domain proteins, VND1 to VND5, are transcriptional regulators of secondary wall biosynthesis in vessels. PLoS One 9, e105726. |
/
| 〈 |
|
〉 |
Home