Chinese Bulletin of Botany ›› 2015, Vol. 50 ›› Issue (3): 388-393.DOI: 10.3724/SP.J.1259.2015.00388

• TECHNIQUES AND METHODS • Previous Articles     Next Articles

An Online, Batch, and Real-time Retrieval Platform for Genomic Sequences and Annotation of Horticultural Plants

Changqing Zhang1, *, Lingfei Shangguan2, Hailing Li1, Jin Wang3   

  1. 1College of Horticulture, Jinling Institute of Technology, Nanjing 210038, China
    2College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
    3Department of Biochemistry, Nanjing University, Nanjing 210093, China
  • Received:2014-06-18 Accepted:2014-12-26 Online:2015-05-01 Published:2015-04-08
  • Contact: Zhang Changqing
  • About author:

    ? These authors contributed equally to this paper

Abstract: The genomes of a large number of horticultural plants have been or are being sequenced. The genomic sequences and annotated data have greatly promoted functional genomics research. To provide a batch-retrieval platform of sub-data for researchers, we developed a bioinformatics tool called Online, Batch, and Real-time Retrieve Platform (OBRRP). The program can be used to retrieve special genomic subsequences or sub-annotations from databases for grape, peach, strawberry, cucumber, watermelon, tomato, orange, apple, kiwifruit, potato, banana, and Arabidopsis. Also, it can be extended to other species by using Gbrowser with its genomic database. OBRRP is a convenient, online, real-time, batch retrieval tool and is available at