植物学报 ›› 2013, Vol. 48 ›› Issue (2): 174-183.DOI: 10.3724/SP.J.1259.2013.00174 cstr: 32102.14.SP.J.1259.2013.00174
王利松*, 杨永, 张宪春
收稿日期:
2012-05-22
修回日期:
2012-10-11
出版日期:
2013-03-01
发布日期:
2013-04-07
通讯作者:
王利松
基金资助:
伞形科囊瓣芹属的系统学和生物地理学研究
Lisong Wang*, Yong Yang, Xianchun Zhang
Received:
2012-05-22
Revised:
2012-10-11
Online:
2013-03-01
Published:
2013-04-07
Contact:
Lisong Wang
摘要: 全球气候变化、环境污染、资源被过度利用、外来物种入侵和生境丧失威胁着地球上物种的生存。分类学研究的主要任务就是在这些物种即将消失之前去发现、记录和认知它们。社会公众、政府决策部门和科学发展本身都对分类学提出了诸多需求。然而, 当前分类学所面临的困境包括认识上的误区、不科学的评价机制、研究队伍的萎缩以及陈旧的知识管理和发布模式等, 这些因素不仅阻碍了分类学的学科发展, 而且也制约了分类学家履行社会责任。利用现代的网络信息技术, 构建一个覆盖分类学研究工作流程、整合已有在线数据资源、满足分类学研究群体、项目和研究机构共同需求的分类学社区网络, 并最终实现分类学的终极目标——在线植物志, 将会极大地改善分类学的知识产出和应用环境, 提升它在当今科学技术发展条件下的竞争力, 使其真正成为一门21世纪的科学。
王利松, 杨永, 张宪春. 在线植物志: 网络时代分类学的方法和实践. 植物学报, 2013, 48(2): 174-183.
Lisong Wang, Yong Yang, Xianchun Zhang. Online Flora: Method and Practice of E-taxonomy. Chinese Bulletin of Botany, 2013, 48(2): 174-183.
Agnarsson I, Kuntner M. (2007). Taxonomy in a Changing World: Seeking Solutions for a Science in Crisis. Systematic Biology, 56: 531-539.Agosti D. (2006). Biodiversity data are out of local taxonomists' reach. Nature, 439: 392-392.Agosti D, Johnson NF. (2002). Taxonomists need better access to published data. Nature, 417: 222-222.Alves RJ, lka, Vianna Filho MDM. (2007). Is classical taxonomy obsolete? Taxon, 56: 287-288.Berendsohn W, Güntsch A, Hoffmann N, Kohlbecker A, Luther K, Müller A. (2011). Biodiversity information platforms: From standards to interoperability. ZooKeys, 150: 71-87.Berendsohn WG, Geoffroy M. (2007). Networking taxonomic concepts – uniting without “unitary-ism”. In: Curry G, Humphries C eds. Biodiversity Databases: From Cottage Industry to Industrial Networks. Systematics Association Special. Taylor & Francis, Boca Raton, FL.Bisby FA, Shimura J, Ruggiero M, Edwards J, Haeuser C. (2002). Taxonomy, at the click of a mouse. Nature, 418: 367.Blackmore S. (2002). Enviroment: Biodiversity Update- Progress in Taxonomy. Science, 298: 365.Bowker GC. (2000). Biodiversity Datadiversity. Social Studies of Science, 30: 643-683.Cigliano MM, Eades D. (2010). New Technologies Challenge the Future of Taxonomy in Orthoptera*. Journal of Orthoptera Research, 19: 15-18.Clark BR, Godfray HCJ, Kitching IJ, Mayo SJ, Scoble MJ. (2009). Taxonomy as an eScience. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 367: 953-966.Constance L. (1964). Systematic Botany-An unending synthesis. Taxon, 13: 257.Davis PH, Heywood VH. (1963). Principles of angiosperm taxonomy, Edinburgh,, Oliver and Boyd.Drew LW. (2011). Are We Losing the Science of Taxonomy? BioScience, 61: 942-946.Ebach MC, Holdrege C. (2005). DNA barcoding is no substitute for taxonomy. Nature, 434: 697-697.Ereshefsky M. (2000). The Poverty of the Linnaean Hierarchy: A Philosophical Study of Biological Taxonomy, Cambridge, Cambridge University Press.Erwin T, Stoev P, Georgiev T, Penev L. (2011). ZooKeys 150: Three and a half years of innovative publishing and growth. ZooKeys, 150: 5-14.Franz NM, Peet RK, Weakley AS. (2008). On the use of taxonomic concepts in support of biodiversity research and taxonomy. In: Wheeler QD ed. The New Taxonomy. Systematics Association Special Taylor & Francis, Boca Raton, FL.Gaston KJ, May RM. (1992). Taxonomy of taxonomists. Nature, 356: 281-282.Godfray HCJ. (2002). Challenges for taxonomy. Nature, 417: 17-19.Godfray HCJ. (2005). Taxonomy as Information Science. Proceedings of the Californian Academy of Science, 56 Suppl. I (16): 170-181.Godfray HCJ. (2007). Linnaeus in the information age Nature 446: 259.Godfray HCJ, Clark BR, Kitching IJ, Mayo SJ, Scoble MJ. (2007). The Web and the Structure of Taxonomy. Systematic Biology, 56: 943-955.Godfray HCJ, Knapp S. (2004). Introduction to Theme Issue, "Taxonomy for the 21st Century". Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 359: 559-569.Haigh A, Mayo SJ, Croat T, Reynolds L, Pinto MM, Boyce PC, Lay L, Bogner J, Clark B, Kostelac C, Hay A. (2009). Interactive web-taxonomy for the Araceae: www.cate-araceae.org. Blumea - Biodiversity, Evolution and Biogeography of Plants, 54: 13-15.Johnson NF. (2007). Biodiversity Informatics. Annual Review of Entomology, 52: 421-438.Johnson NF. (2012). A collaborative, integrated and electronic future for taxonomy. Invertebrate Systematics, 25: 471-475.King D, Morse D, Willis A, Dil A. (2011). Towards the bibliography of life. ZooKeys, 150: 151-166.Knapp S, McNeill J, Turland NJ. (2011). Changes to publication requirements made at the XVIII International Botanical Congress in Melbourne - what does e-publication mean for you? PhytoKeys, 6: 5-11.Li DZ. (2008). Floristics and Plant Biogeography in China. Journal of Integrative Plant Biology, 50: 771-777.Li J. (2009). China Searches for an 11th-Hour Lifesaver for a Dying Discipline. Science, 325: 31-31.Ma J, Clemants S. (2006). A history and overview of the Flora Reipublicae Popularis Sinicae (FRPS, Flora of China, Chinese edition, 1959-2004). Taxon, 55: 451-460.Martin, T. J, Wheeler QD, Raven PH, Wilson EO. (2004). Taxonomists and Conservation. Science, 305: 1104c-1105.Mayo SJ. (2008). Alpha e-taxonomy: responses from the systematics community to the biodiversity crisis. Kew Bulletin, 63: 1-16.MerxmüLler H. (1972). Systematic botany–an unachieved synthesis. Biological Journal of the Linnean Society, 4: 311-321.Miller G. (2005a). TAXONOMY: Linnaeus's Legacy Carries On. Science, 307: 1038a-1039.Miller G. (2005b). TAXONOMY: Taxonomy's Elusive Grail. Science, 307: 1038b.Miller JR. (2005c). Biodiversity conservation and the extinction of experience. Trends in Ecology & Evolution, 20: 430-434.Mora C, Tittensor DP, Adl S, Simpson AGB, Worm B. (2011). How Many Species Are There on Earth and in the Ocean? PLoS Biol, 9: e1001127.Page R. (2011). Extracting scientific articles from a large digital archive: BioStor and the Biodiversity Heritage Library. BMC Bioinformatics, 12: 187.Patterson DJ, Remsen D, Marino WA, Norton C. (2006). Taxonomic Indexing: Extending the Role of Taxonomy. Systematic Biology, 55: 367-373.Pearson DL, Hamilton AL, Erwin TL. (2011). Recovery Plan for the Endangered Taxonomy Profession. BioScience, 61: 58-63.Penev L, Kress WJ, Knapp S, Li D-Z, Renner S. (2010). Fast, linked, and open – the future of taxonomic publishing for plants: launching the journal PhytoKeys. PhytoKeys, 1: 1-14.Raven P. (2004). Taxonomy: where are we now? Philosophical Transactions of the Royal Society B: Biological Sciences, 359: 729-730.Savolainen V, Cowan RS, Vogler AP, Roderick GK, Lane R. (2005). Towards writing the encyclopaedia of life: an introduction to DNA barcoding. Philosophical Transactions of the Royal Society B: Biological Sciences, 360: 1805-1811.Scoble M. (2004). Unitary or unified taxonomy? Philosophical Transactions of the Royal Society B: Biological Sciences, 359: 699-710.Simonetti JA. (1997). Biodiversity and a taxonomy of Chilean taxonomists. Biodiversity and Conservation, 6: 633-637.Smith G, Figueiredo E. (2010). E-taxonomy: an affordable tool to fill the biodiversity knowledge gap. Biodiversity and Conservation, 19: 829-836.Smith V, Penev L. (2011). Collaborative electronic infrastructures to accelerate taxonomic research. ZooKeys, 150: 1-3.Smith V, Rycroft S, Brake I, Scott B, Baker E, Livermore L, Blagoderov V, Roberts D. (2011). Scratchpads 2.0: a Virtual Research Environment supporting scholarly collaboration, communication and data publication in biodiversity science. ZooKeys, 150: 53-70.Smith V, Rycroft S, Harman K, Scott B, Roberts D. (2009). Scratchpads: a data-publishing framework to build, share and manage information on the diversity of life. BMC Bioinformatics, 10: S6.Stuessy TF. (1990). Plant taxonomy : the systematic evaluation of comparative data, New York, Columbia University Press.Stuessy TF. (2009). Plant Taxonomy: The Systematic Evaluation of Comparative Data, 2nd edition., Columbia University Press.Tillier S, Roberts D. (2006). Taxonomy on the fly in a European web project. Nature, 440: 24-24.Ung V, Dubus G, Zaragüeta-Bagils R, Vignes-Lebbe R. (2010). Xper2: introducing e-taxonomy. Bioinformatics, 26: 703-704.Walter DE, Winterton S. (2007). Keys and the Crisis in Taxonomy: Extinction or Reinvention? Annual Review of Entomology, 52: 193-208.Wang LS, Zhang YC, Xue NX, Qin HN. (2011). Floristics of Higher Plants in China-Report from Catalogue of Life: Higher Plants in China Database. Plant Diversity and Resources, 33: 69-74.Wheeler QD. (2004). Taxonomic triage and the poverty of phylogeny. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 359: 571-583.Wheeler QD, Raven PH, Wilson EO. (2004). Taxonomy: Impediment or Expedient? Science, 303: 285.Wilson EO. (2003). The encyclopedia of life. Trends in Ecology & Evolution, 18: 77-80.Wilson EO. (2004). Taxonomy as a fundamental discipline. Philosophical Transactions of the Royal Society B: Biological Sciences, 359: 739-739.Yang QE, Zhu GH, Hong DY, Wu ZY, Raven PH. (2005). World's Largest Flora Completed. Science, 309: 2163b.Zauner H. (2009). Evolving e-taxonomy. BMC Evolutionary Biology, 9: 141.中国科学院生物多样性委员会. (2011). 中国高等植物名录. 见.中国生物物种名录-2011版 CD-ROM, 北京, 中国科学院生物多样性委员会,科学出版社.王文采. (2005). 关于我国植物系统学研究的一些感想和建议. 植物分类学报, 43: 398-402.王利松, 陈彬, 纪力强, 马克平. (2010). 生物多样性信息学研究进展. 生物多样性, 18: 429-443.刘全儒, 于明, 马金双. (2007). 中国地方植物志评述. 广西植物, 27: 844-849.杨亲二. (2001). 过分依赖SCI正在损害我国的传统分类学研究——从《 Nature 》上的两封信说开去. 植物分类学报, 39: 283-288.马金双. (2011). 东亚高等植物分类学文献概览, 北京, 高等教育出版社. |
[1] | 周璇, 张生芳, 刘宁, 鲁玉杰, 郑斯竹, 杨晓军, 路园园, 刘梅柯, 白明. 储藏物甲虫系统地位厘清及拉英汉名录更新[J]. 生物多样性, 2025, 33(4): 24238-. |
[2] | 胡宗刚. 抗战胜利后中美曾筹划合编《中国植物志》[J]. 生物多样性, 2024, 32(6): 24220-. |
[3] | 李昕峪, 张雅璇, 闫美辰, 杨蕊含, 张小庆, 姚志远. 2023年世界现生蜘蛛目新分类单元[J]. 生物多样性, 2024, 32(11): 24181-. |
[4] | 王科, 赵明君, 蔡磊. 世界及中国菌物新命名发表概况(2023年)[J]. 生物多样性, 2024, 32(11): 24361-. |
[5] | 何德奎, 陈晋南, 丁刘勇, 徐一扬, 黄俊豪, 隋晓云. 雅鲁藏布江鱼类多样性现状与分布格局[J]. 生物多样性, 2024, 32(11): 24143-. |
[6] | 王露露, 杨智, 杨永. 利用标本组学推进植物超级DNA条形码研究[J]. 植物学报, 2023, 58(5): 831-842. |
[7] | 宋会银, 胡征宇, 刘国祥. 绿藻门小球藻科的分类学研究进展[J]. 生物多样性, 2023, 31(2): 22083-. |
[8] | 李治中, 彭帅, 王青锋, 李伟, 梁士楚, 陈进明. 中国海菜花属植物隐种多样性[J]. 生物多样性, 2023, 31(2): 22394-. |
[9] | 王科, 蔡磊. 世界菌物新命名发表概况(2022年)[J]. 生物多样性, 2023, 31(10): 23176-. |
[10] | 周璇, 罗一平, 金子, 乔宇晴, 张艺瑶, 李露露, 路园园, 刘宁, 刘梅柯, 白明. 2022年全球鞘翅目现生类群新分类单元[J]. 生物多样性, 2023, 31(10): 23202-. |
[11] | 杨蕊含, 闫美辰, 张露丹, 刘宏鑫, 许国丰, 何巧巧, 姚志远. 2022年世界蜘蛛目新分类单元[J]. 生物多样性, 2023, 31(10): 23175-. |
[12] | 张露丹, 卢影, 褚畅, 何巧巧, 姚志远. 2021年世界蜘蛛新分类单元[J]. 生物多样性, 2022, 30(8): 22163-. |
[13] | 王科, 蔡磊. 世界菌物新命名发表概况(2021年)[J]. 生物多样性, 2022, 30(8): 22277-. |
[14] | 林晨, 张冰, 王亮, 杨定. 2021年中国双翅目新分类单元[J]. 生物多样性, 2022, 30(8): 22192-. |
[15] | 杜诚, 刘军, 刘夙, 马金双. 中国植物分类学者的历史与现状[J]. 生物多样性, 2022, 30(7): 22355-. |
阅读次数 | ||||||
全文 |
|
|||||
摘要 |
|
|||||