Chinese Bulletin of Botany ›› 2016, Vol. 51 ›› Issue (6): 827-840.DOI: 10.11983/CBB15212
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Mingjie He1,2†, Yichen Sun2†, Xiaoyuan Cheng2, Dongxue Shi2, Diqin Li1, Yiyin Chen3, Yongkun Feng2, Lu Liu2, Tengfei Fan2, Chao Yang3, Fengqiu Cao4*, Laihua Liu1,2*
Received:
2015-12-03
Accepted:
2016-04-01
Online:
2016-11-01
Published:
2016-12-02
Contact:
Cao Fengqiu,Liu Laihua
About author:
# Co-first authors
Mingjie He, Yichen Sun, Xiaoyuan Cheng, Dongxue Shi, Diqin Li, Yiyin Chen, Yongkun Feng, Lu Liu, Tengfei Fan, Chao Yang, Fengqiu Cao, Laihua Liu. Current Research Advances on Glutamate Receptors (GLRs) in Plants[J]. Chinese Bulletin of Botany, 2016, 51(6): 827-840.
Figure 1 Phylogenetic tree of glutamate receptor homologs from Arabidopsis, human beings and bacteriumThe amino acid sequence alignment was performed using Clustal W (from Lasergene DNA*) and the phylogenetic tree was generated by parsimony analysis using PAUP* 4.10b software. At: Arabidopsis thaliana; Hs: Homo sapiens; Ssp, Synechocystis sp. (strain) PCC6803. AtGLR protein sequences were extracted from Tair, HsGLuR1-7 and SspGLuR protein sequences were obtained from NCBI database. GenBank accession number or gene models for obtaining putative full-length protein sequences are described as below: AtGLR1.1 (At3g04110), AtGLR1.2 (At5g48400), AtGLR1.3 (At5g48410), AtGLR1.4 (At3g07520), AtGLR2.1 (At5g27100), AtGLR2.2 (At2g24720), AtGLR2.3 (At2g24710), AtGLR2.4 (At4g31710), AtGLR2.5 (At5g11210), AtGLR2.6 (At5g11180), AtGLR2.7 (At2g29120), AtGLR2.8 (At2g29110), AtGLR2.9 (At2g29100), AtGLR3.1 (At2g17260), AtGLR3.2 (At4g35290), AtGLR3.3 (At1g42540), AtGLR3.4 (At1g05200), AtGLR3.5 (At2g32390), AtGLR3.6 (At3g51480), AtGLR3.7 (At2g32400); HsGLuR1 (NP_000818.1), HsGLuR2 (NP_786944.1), HsGLuR3 (NP_015564.1), HsGLuR4 (NP_000820.1), HsGLuR5 (NP_000821.1), HsGLuR6 (CAC67487.1), HsGLuR7 (NP_000822); SspGLuR0 (BAA17851.1).
Figure 2 Putative topology of a representative glutamate receptor (GLR3.5) from ArabidopsisThe protein sequence of AtGLR3.5 was extracted from Aramemnon (http://aramemnon.uni-koeln.de/index.ep). Topological (or hydrophobicity) prediction of protein was performed using a program from a web server http://www.cbs.dtu.dk/services/TMHMM/. AtGLR3.5 is predicted to exhibit 3 trans-membrane domains (M1, M3, and M4), 1 domain (M2) imbedded in a lipid-layer, 2 domains S1 and S2 locating outside cytoplasm for ligand binding, and a C-terminal region towards the cytosol. Numbers indicate positions of amino acid residues in a peptide sequence.
基因名称及 登录号 | 家族 | 苗龄 | 表达位点 | 参考文献 | ||
---|---|---|---|---|---|---|
器官水平 | 组织水平 | 亚细胞水平 | ||||
AtGLR1.1 At3g04110 | I | 1周 | 根、茎、叶 | 根部皮层, 托叶着生部 | NR | Chiu et al., 2002; Roy et al., 2008 |
4周 | 全展叶叶沿; 根系除根尖外各组织 | NR | ||||
8周 | 主要是根、叶; 花、角果中很微弱 | 花、角果中检测不到GUS信号 | NR | |||
AtGLR1.2 At5g48400 | 4周后 | 根、茎、叶、花、角果; 主要是根与角果 | 花粉管 | NR | ||
AtGLR1.3 At5g48410 | 4周 | 根、茎、叶, 叶中很微弱 | NR | NR | ||
8周 | 叶和花中微弱; 主要是根与角果 | NR | NR | |||
AtGLR1.4 At3g07520 | 4周后 | 根、茎、叶、花、角果 | NR | NR | ||
AtGLR2.1 At5g27100 | II | 1周后 | 根、茎、叶、叶柄 | 根系除根尖外各组织; 托叶着生部位 | NR | |
4周后 | 根 | 根系所有组织; 花药和胚珠检测到微弱且转瞬即逝的GUS信号 | NR | |||
AtGLR2.2 At2g24720 | 4周后 | 根 | NR | NR | ||
AtGLR2.3 At2g24710 | 4周后 | 根 | NR | NR | ||
AtGLR2.4 At4g31710 | 4周后 | 根、角果 | NR | NR | ||
AtGLR2.5 At5g11210 | 4周后 | 根、茎、叶、花、角果 | NR | NR | ||
AtGLR2.6 At5g11180 | 4周后 | 根 | NR | NR | ||
AtGLR2.7 At2g29120 | 4周后 | 叶、角果, 根中微弱 | NR | NR | ||
AtGLR2.8 At2g29110 | 4周后 | 根、叶柄、叶、角果 | NR | NR | Chiu et al., 2002 Roy et al., 2008 | |
AtGLR2.9 At2g29100 | 4周 | 根、叶、茎、叶柄 | NR | NR | ||
8周 | 根 | NR | NR | |||
AtGLR3.1 At2g17260 | III | 5天后 | 根、茎、叶、叶柄 | 所有维管组织; 保卫细胞 | NR | Cho et al., 2009 Kim et al., 2001; Kong et al., 2015; Meyerhoff et al., 2005 Turano et al., 2002 Teardo et al., 2011 Teardo et al., 2015 |
8周 | 根、茎、叶、花、角果 | 花丝和花药连接部位强烈表达 | NR | |||
AtGLR3.2 At4g35290 | 7天后 | 根、茎、叶柄、叶 | 所有维管组织及其邻近的导管, 随着植物生长表达更强烈; 根系韧皮部细胞中表达量远高于邻近细胞, 原生韧皮部更为强烈 | NR | ||
8周 | 根、茎、叶、花、角果, 主要是叶与角果 | 花、茎维管组织; 花芽; 胚珠, 尤其是外皮层和生长中心 | NR | |||
AtGLR3.3 At1g42540 | 4周后 | 根、茎、叶柄、叶、角果 | NR | |||
AtGLR3.4 At1g05200 | 4周后 | 根、茎、叶、花、角果, 莲座叶中最强 | 叶肉组织; 维管束; 保卫细胞, 排水孔; 根内外皮层, 根毛 | 细胞质膜, 叶绿体内膜 | ||
AtGLR3.5 At2g32390 | 0 | 种子发芽时强烈, 随发芽完成降低 | 胚胎与子叶中强烈表达 | 线粒体内膜; 叶绿体膜 | ||
4周后 | 根、茎、叶、花、角果 | NR | ||||
AtGLR3.7 At2g32400 | 整个生长阶段 | 所有器官 | 所有组织 | 细胞质膜 |
Table 1 Overview of glutamate receptors-like receptors (AtGLRs) expression pattern in Arabidopsis thaliana
基因名称及 登录号 | 家族 | 苗龄 | 表达位点 | 参考文献 | ||
---|---|---|---|---|---|---|
器官水平 | 组织水平 | 亚细胞水平 | ||||
AtGLR1.1 At3g04110 | I | 1周 | 根、茎、叶 | 根部皮层, 托叶着生部 | NR | Chiu et al., 2002; Roy et al., 2008 |
4周 | 全展叶叶沿; 根系除根尖外各组织 | NR | ||||
8周 | 主要是根、叶; 花、角果中很微弱 | 花、角果中检测不到GUS信号 | NR | |||
AtGLR1.2 At5g48400 | 4周后 | 根、茎、叶、花、角果; 主要是根与角果 | 花粉管 | NR | ||
AtGLR1.3 At5g48410 | 4周 | 根、茎、叶, 叶中很微弱 | NR | NR | ||
8周 | 叶和花中微弱; 主要是根与角果 | NR | NR | |||
AtGLR1.4 At3g07520 | 4周后 | 根、茎、叶、花、角果 | NR | NR | ||
AtGLR2.1 At5g27100 | II | 1周后 | 根、茎、叶、叶柄 | 根系除根尖外各组织; 托叶着生部位 | NR | |
4周后 | 根 | 根系所有组织; 花药和胚珠检测到微弱且转瞬即逝的GUS信号 | NR | |||
AtGLR2.2 At2g24720 | 4周后 | 根 | NR | NR | ||
AtGLR2.3 At2g24710 | 4周后 | 根 | NR | NR | ||
AtGLR2.4 At4g31710 | 4周后 | 根、角果 | NR | NR | ||
AtGLR2.5 At5g11210 | 4周后 | 根、茎、叶、花、角果 | NR | NR | ||
AtGLR2.6 At5g11180 | 4周后 | 根 | NR | NR | ||
AtGLR2.7 At2g29120 | 4周后 | 叶、角果, 根中微弱 | NR | NR | ||
AtGLR2.8 At2g29110 | 4周后 | 根、叶柄、叶、角果 | NR | NR | Chiu et al., 2002 Roy et al., 2008 | |
AtGLR2.9 At2g29100 | 4周 | 根、叶、茎、叶柄 | NR | NR | ||
8周 | 根 | NR | NR | |||
AtGLR3.1 At2g17260 | III | 5天后 | 根、茎、叶、叶柄 | 所有维管组织; 保卫细胞 | NR | Cho et al., 2009 Kim et al., 2001; Kong et al., 2015; Meyerhoff et al., 2005 Turano et al., 2002 Teardo et al., 2011 Teardo et al., 2015 |
8周 | 根、茎、叶、花、角果 | 花丝和花药连接部位强烈表达 | NR | |||
AtGLR3.2 At4g35290 | 7天后 | 根、茎、叶柄、叶 | 所有维管组织及其邻近的导管, 随着植物生长表达更强烈; 根系韧皮部细胞中表达量远高于邻近细胞, 原生韧皮部更为强烈 | NR | ||
8周 | 根、茎、叶、花、角果, 主要是叶与角果 | 花、茎维管组织; 花芽; 胚珠, 尤其是外皮层和生长中心 | NR | |||
AtGLR3.3 At1g42540 | 4周后 | 根、茎、叶柄、叶、角果 | NR | |||
AtGLR3.4 At1g05200 | 4周后 | 根、茎、叶、花、角果, 莲座叶中最强 | 叶肉组织; 维管束; 保卫细胞, 排水孔; 根内外皮层, 根毛 | 细胞质膜, 叶绿体内膜 | ||
AtGLR3.5 At2g32390 | 0 | 种子发芽时强烈, 随发芽完成降低 | 胚胎与子叶中强烈表达 | 线粒体内膜; 叶绿体膜 | ||
4周后 | 根、茎、叶、花、角果 | NR | ||||
AtGLR3.7 At2g32400 | 整个生长阶段 | 所有器官 | 所有组织 | 细胞质膜 |
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