Identification of a New OsBRI1 Weak Allele and Analysis of its Function in Grain Size Control
Received date: 2019-12-25
Accepted date: 2020-03-23
Online published: 2020-03-23
Rice (Oryza sativa) grain size and grain weight are key agronomic traits that affect rice yield. Cloning and study of grain size genes are helpful to increase rice production. In order to further understand the mechanism of rice grain size control, a set of mutants with altered grain size from an EMS-treated elite japonica cultivar KYJ (Kuanyejing) were isolated. smg12 exhibits small grains, short plants, and reduced number of primary branches and secondary branches. Genetic analyses show that the smg12 mutant phenotypes are controlled by a single recessive gene. Our celluar analyses show that the small grain size phenotype of smg12 is caused by the decrease in cell size of glumes, indicating that SMG12 affects cell expansion. By using the Mutmap method, we reveal that the candidate gene for SMG12 is OsBRI1, which encodes a brassinolide receptor kinase. The smg12 mutant causes a substitution of the 2 074th base (C to T) in OsBRI1, which results in an amino acid change (proline to serine). Therefore, this study identified a new mutant allele of OsBRI1 and provides a cellular and molecular basis for BR-mediated grain size control in rice.
Key words: rice; grain size; cell expansion; Mutmap; OsBRI1
Liurong Guan, Zupei Liu, Ran Xu, Penggen Duan, Guozheng Zhang, Haiyue Yu, Jing Li, Yuehua Luo, Yunhai Li . Identification of a New OsBRI1 Weak Allele and Analysis of its Function in Grain Size Control[J]. Chinese Bulletin of Botany, 2020 , 55(3) : 279 -286 . DOI: 10.11983/CBB19239
[1] | 宫李辉, 高振宇, 马伯军, 钱前 (2011). 水稻粒形遗传的研究进展. 植物学报 46, 597-605. |
[2] | 侯雷平, 李梅兰 (2001). 油菜素内酯(BR)促进植物生长机理研究进展. 植物学通报 18, 560-566. |
[3] | Abe A, Kosugi S, Yoshida K, Natsume S, Takagi H, Kanzaki H, Matsumura H, Yoshida K, Mitsuoka C, Tamiru M, Innan H, Canno L, Kamoun S, Terauchi R (2012). Genome sequencing reveals agronomically important loci in rice using Mutmap. Nat Biotechnol 30, 174-178. |
[4] | Fan CC, Xing YZ, Mao HL, Lu TT, Han B, Xu CG, Li XH, Zhang QF (2006). GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein. Theor Appl Genet 112, 1164-1171. |
[5] | James MG, Denyer K, Myers AM (2003). Starch synthesis in the cereal endosperm. Curr Opin Plant Biol 6, 215-222. |
[6] | Li N, Xu R, Duan PG, Li YH (2018). Control of grain size in rice. Plant Reprod 31, 237-251. |
[7] | Li N, Xu R, Li YH (2019). Molecular networks of seed size control in plants. Annu Rev Plant Biol 70, 435-463. |
[8] | Liu LC, Tong HN, Xiao YH, Che RH, Xu F, Hu B, Liang CZ, Chu JF, Li JY, Chu CC (2015a). Activation of Big Grain1 significantly improves grain size by regulating auxin transport in rice. Proc Natl Acad Sci USA 112, 11102-11107. |
[9] | Liu SY, Hua L, Dong SJ, Chen HQ, Zhu XD, Jiang JE, Zhang F, Li YH, Fang XH, Chen F (2015b). OsMAPK6, a mitogen-activated protein kinase, influences rice grain size and biomass production. Plant J 84, 672-681. |
[10] | Mao HL, Sun SY, Yao JL, Wang CR, Yu SB, Xu CG, Li XH, Zhang QF (2010). Linking differential domain functions of the GS3 protein to natural variation of grain size in rice. Proc Natl Acad Sci USA 107, 19579-19584. |
[11] | Meng XZ, Zhang SQ (2013). MAPK cascades in plant disease resistance signaling. Annu Rev Phytopathol 51, 245-266. |
[12] | Miura K, Ashikari M, Matsuoka M (2011). The role of QTLs in the breeding of high-yielding rice. Trends Plant Sci 16, 319-326. |
[13] | Morinaka Y, Sakamoto T, Inukai Y, Agetsuma M, Kitano H, Ashikari M, Matsuoka M (2006). Morphological alteration caused by brassinosteroid insensitivity increases the biomass and grain production of rice. Plant Physiol 141, 924-931. |
[14] | Nakamura A, Fujioka S, Sunohara H, Kamiya N, Hong Z, Inukai Y, Miura K, Takatsuto S, Yoshida S, Ueguchi- Tanaka M, Hasegawa Y, Kitano H, Matsuoka M (2006). The role of OsBRI1 and its homologous genes, OsBRL1 and OsBRL3, in rice. Plant Physiol 140, 580-590. |
[15] | Sakamoto T, Matsuoka M (2008). Identifying and exploiting grain yield genes in rice. Curr Opin Plant Biol 11, 209-214. |
[16] | Shomura A, Izawa T, Ebana K, Ebitani T, Kanegae H, Konishi S, Yano M (2008). Deletion in a gene associated with grain size increased yields during rice domestication. Nat Genet 40, 1023-1028. |
[17] | Si LZ, Chen JY, Huang XH, Gong H, Luo JH, Hou QQ, Zhou TY, Lu TT, Zhu JJ, Shangguan YY, Chen EW, Gong CX, Zhao Q, Jing YF, Zhao Y, Li Y, Cui LL, Fan DL, Lu YQ, Weng QJ, Wang YC, Zhan QL, Liu KY, Wei XH, An K, An G, Han B (2016). OsSPL13 controls grain size in cultivated rice. Nat Genet 48, 447-456. |
[18] | Song XJ, Huang W, Shi M, Zhu MZ, Lin HX (2007). A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase. Nat Genet 39, 623-630. |
[19] | Takagi H, Tamiru M, Abe A, Yoshida K, Uemura A, Yaegashi H, Obara T, Oikawa K, Utsushi H, Kanzaki E, Mitsuoka C, Natsume S, Kosugi S, Kanzaki H, Matsumura H, Urasaki N, Kamoun S, Terauchi R (2015). Mutmap accelerates breeding of a salt-tolerant rice cultivar. Nat Biotechnol 33, 445-449. |
[20] | Tanabe S, Ashikari M, Fujioka S, Takatsuto S, Yoshida S, Yano M, Yoshimura A, Kotano H, Matsuoka M, Fujisawa Y, Kato H, Lwasaki Y (2005). A novel cytochrome P450 is implicated in brassinosteroid biosynthesis via the characterization of a rice dwarf mutant, dwarf11, with reduced seed length. Plant Cell 17, 776-790. |
[21] | Tanaka A, Nakagawa H, Tomita C, Shimatani Z, Ohtake M, Nomura T, Jiang CJ, Dubozet JG, Kikuchi S, Sekimoto H, Yokota T, Asami T, Kamakura T, Mori M (2009). BRASSINOSTEROID UPREGULATED1, encoding a helix-loop-helix protein, is a novel gene involved in brassinosteroid signaling and controls bending of the lamina joint in rice. Plant Physiol 151, 669-680. |
[22] | Tong HN, Liu LC, Jin Y, Du L, Yin YH, Qian Q, Zhu LH, Chu CC (2012). DWARF AND LOW-TILLERING acts as a direct downstream target of a GSK3/SHAGGY-like kinase to mediate brassinosteroid responses in rice. Plant Cell 24, 2562-2577. |
[23] | Wang SK, Wu K, Yuan QB, Liu XY, Liu ZB, Lin XY, Zeng RZ, Zhu HT, Dong GJ, Qian Q, Zhang GQ, Fu XD (2012). Control of grain size, shape and quality by OsSPL16 in rice. Nat Genet 44, 950-954. |
[24] | Xing YZ, Zhang QF (2010). Genetic and molecular bases of rice yield. Annu Rev Plant Biol 61, 421-442. |
[25] | Xu R, Duan PG, Yu HY, Zhou ZK, Zhang BL, Wang RC, Li J, Zhang GZ, Zhuang SS, Lyu J, Li N, Chai TY, Tian ZX, Yao SG, Li YH (2018a). Control of grain size and weight by the OsMKKK10-OsMKK4-OsMAPK6 signaling pathway in rice. Mol Plant 11, 860-873. |
[26] | Xu R, Yu HY, Wang JM, Duan PG, Zhang BL, Li J, Li Y, Xu JS, Lyu J, Li N, Chai TY, Li YH (2018b). A mitogen-activated protein kinase phosphatase influences grain size and weight in rice. Plant J 95, 937-946. |
[27] | Zhang C, Bai MY, Chong K (2014). Brassinosteroid-mediated regulation of agronomic traits in rice. Plant Cell Rep 33, 683-696. |
[28] | Zhao JF, Wu CX, Yuan SJ, Yin L, Sun W, Zhao QL, Zhao BH, Li XY (2013). Kinase activity of OsBRI1 is essential for brassinosteroids to regulate rice growth and development. Plant Sci 199-200, 113-120. |
[29] | Zhou SR, Yin LL, Xue HW (2013). Functional genomics based understanding of rice endosperm development. Curr Opin Plant Biol 16, 236-246. |
[30] | Zuo JR, Li JY (2014). Molecular genetic dissection of quantitative trait loci regulating rice grain size. Annu Rev Genet 48, 99-118. |
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