基于模式产地的分子证据澄清南平鳞毛蕨的分类学地位
作者简介:白克智, 1959年开始在中国科学院植物研究所工作, 先后任助理研究员、研究员, 长期从事植物生长发育及其调控的研究。1986年,其主持的“满江红生物学特性研究”荣获中国科学院科技进步二等奖。曾任《植物生理学报》编委、《植物学报》常务编委、中国植物生长调节剂协会主任等职。
收稿日期: 2017-11-13
网络出版日期: 2018-03-13
基金资助
科技部科技基础专项(No.2015FY110200)和上海市绿化和市容管理局科学技术项目(No.G162401)
Clarifying the Taxonomic Status of Dryopteris yenpingensis based on Materials from the Type Locality
Received date: 2017-11-13
Online published: 2018-03-13
地球上有多少物种一直以来都是人们极度关注的问题, 而存疑物种是造成该问题难以解决的重要阻碍之一。目前, 模式标本是存疑物种得以确定的唯一凭证标准, 然而, 因其特殊的分类学地位而难以进行有效的观察和研究。因此, 前往模式产地寻找存疑物种的原始信息成为最有效的替代途径。随着分子生物学, 特别是DNA条形码技术在物种分类与鉴定中的广泛应用, 准确而快速鉴定存疑物种成为可能。以存疑物种——南平鳞毛蕨(Dryopteris yenpingensis)为例, 利用来自模式产地的分子数据进行DNA条形码分析, 并结合形态学特征澄清了南平鳞毛蕨的分类学地位, 确定南平鳞毛蕨与荔波鳞毛蕨(D. liboensis)为同一物种, 同意将荔波鳞毛蕨作为其异名。研究结果和方法可为今后澄清更多存疑物种的分类学地位提供参考。
舒江平, 罗俊杰, 韦宏金, 严岳鸿 . 基于模式产地的分子证据澄清南平鳞毛蕨的分类学地位[J]. 植物学报, 2018 , 53(6) : 793 -800 . DOI: 10.11983/CBB17215
Calculating the number of species on earth has always been an issue of extreme concern, and suspicious species are among the most important obstacles to solve. Presently, the type specimen is the only criteria for identifying the suspicious species but is difficult to observe and study effectively because of its special taxonomic position. Therefore, the mostly effective way is to search the original information for suspicious species in the type locality. As molecular biological method, DNA barcoding, has been widely used in species classification and identification and can be used to identify a suspicious species accurately and quickly. In this study, a suspicious species, Dryopteris yenpingensis, was used as an example. We used DNA barcode analysis with the molecular data for the material from the type locality and combined morphological traits to clarify the doubtful taxonomic status of D. yenpingensis. The results supported D. yenpingensis and D. liboensis as the same species, and D. liboensis should be treated as a synonym. This study provides a reference for clarifying the taxonomic status of other suspicious species.
[1] | 《福建植物志》编写组 (1991). 福建植物志(第1卷) (修订本). 福州: 福建科学技术出版社. pp. 210-210. |
[2] | 贾渝, 何思 (2016). 中国生物物种名录——苔藓植物. 北京: 科学出版社. |
[3] | 李春香, 陆树刚 (2006). 鳞毛蕨科植物的系统发育: 叶绿体rbcL序列的证据. 植物分类学报 44, 503-515. |
[4] | 李树刚 (1982). 润楠属. 见: 中国科学院中国植物志编辑委员会, 中国植物志, 第31卷. 北京: 科学出版社. pp. 7-68. |
[5] | 刘红梅, 张宪春, 曾辉 (2009). DNA序列在蕨类分子系统学研究中的应用. 植物学报 44, 143-158. |
[6] | 卢金梅, 李德铢, 吴丁 (2007). 鳞毛蕨科的孢子形态研究. 云南植物研究 29, 397-408. |
[7] | 王凡红, 卢金梅, 李德铢 (2014). 铁线蕨属3个种的分布新记录. 西北植物学报 34, 1055-1060. |
[8] | 王全喜, 戴锡玲 (2010). 中国水龙骨目(真蕨目)植物孢子形态的研究. 北京: 科学出版社. |
[9] | 王全喜, 于晶 (2003). 扫描电镜下真蕨目孢子表面纹饰的分类. 云南植物研究 25, 313-320. |
[10] | 邢公侠 (1982). 蕨类名词及名称. 北京: 科学出版社. |
[11] | 严岳鸿, 张宪春, 周喜乐, 孙久琼 (2016). 中国生物物种名录, 第1卷. 植物(蕨类植物). 北京: 科学出版社. |
[12] | 张宪春, 卫然, 刘红梅, 何丽娟, 王丽, 张钢民 (2013). 中国现代石松类和蕨类的系统发育与分类系统. 植物学报 48, 119-137. |
[13] | 张宪春, 邢公侠 (1999). 纪念秦仁昌论文集. 北京: 中国林业出版社. |
[14] | 张宪春, 姚正明 (2017). 中国茂兰石松类和蕨类植物. 北京: 科学出版社. |
[15] | CBOL Plant Working Group (2009). A DNA barcode for land plants.Proc Natl Acad Sci USA 106, 12794-12797. |
[16] | Ching RC (1931). The studies of Chinese ferns. V.Bull Fan Mem Inst Biol 2, 185-223. |
[17] | Ching RC (1938). A revision of the Chinese and Sikkim HimalayanDryopteris with reference to some species from neighbouring regions. Bull Fan Mem Inst Biol Bot Ser 8, 363-507. |
[18] | Ching RC (1941). New family and combinations of ferns.Bull Fan Mem Inst Biol Bot Ser 10, 235-256. |
[19] | Ebach MC, Holdrege C (2005). DNA barcoding is no substitute for taxonomy.Nature 434, 697. |
[20] | Hall TA (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT.Nucl Acids Symp Ser 41, 95-98. |
[21] | Hebert PDN, Cywinska A, Ball SL, deWaard JR (2003). Biological identifications through DNA barcodes.Proc Roy Soc B: Biol Sci 270, 313-321. |
[22] | Hollingsworth PM, Graham SW, Little DP (2011). Choosing and using a plant DNA barcode.PLoS One 6, e19254. |
[23] | Holttum RE (1988). Studies in the fern genera allied to Tectaria Cav. VII. Species of Tectaria sect. Sagenia(Presl) Holttum in Asia excluding Malesia. Kew Bull 43, 475-489. |
[24] | Liou H (1934). Lauracées de Chine et d’Indochine: Contribution à l’étude Systématique et Phytogéographique. Paris: Hermann et Cie. |
[25] | May RM (1988). How many species are there on earth?Science 241, 1441-1449. |
[26] | May RM (1990). How many species?Philos Trans Roy Soc B: Biol Sci 330, 293-304. |
[27] | Meusnier I, Singer GAC, Landry JF, Hickey DA, Hebert PDN, Hajibabaei M (2008). A universal DNA mini- barcode for biodiversity analysis.BMC Genom 9, 214. |
[28] | Mora C, Tittensor DP, Adl S, Simpson AGB, Worm B (2011). How many species are there on earth and in the ocean?PLoS Biol 9, e1001127. |
[29] | Ronquist F, Huelsenbeck JP (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models.Bioinforma- tics 19, 1572-1574. |
[30] | Scheffers BR, Joppa LN, Pimm SL, Laurance WF (2012). What we know and don’t know about Earth’s missing biodiversity.Trends Ecol Evol 27, 501-510. |
[31] | Schindel DE, Miller SE (2005). DNA barcoding a useful tool for taxonomists.Nature 435, 17. |
[32] | Shu JP, Shang H, Jin DM, Wei HJ, Zhou XL, Liu HM, Gu YF, Wang Y, Wang FG, Shen H, Zhang R, Adjie B, Yan YH (2017). Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans(Gleicheniaceae) as an example. PLoS One 12, e0164604. |
[33] | Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013). MEGA6: molecular evolutionary genetics analysis version 6.0.Mol Biol Evol 30, 2725-2729. |
[34] | Tryon AF, Lugardon B (1991). Spores of the Pteridophyta. New York: Springer. |
[35] | Wei FN, Henk W (2008). Machilus. In: Wu ZY, Raven PH, Hong DY, eds. Flora of China, Vol. 7. Beijing: Science Press; St. Louis: Missouri Botanical Garden Press. pp. 201-224. |
[36] | Zhang LB, Wang PS, Wang XY (2012). Dryopteris liboensis(Dryopteridaceae), a new species in Dryopteris sect. Erythrovariae from Guizhou, China. Novon 22, 256-259. |
[37] | Zhang LB, Wu SG, Xiang JY, Xing FW, He H, Wang FG, Lu SG, Dong SY, Barrington DS, Iwatsuki K, Christenhusz MJM, Mickel JT, Kato M, Gilbert MG (2013). Dryopteridaceae. In: Wu ZY, Raven PH, Hong DY, eds. Flora of China, Vol. 2-3(Pteridophytes). Beijing: Science Press; St. Louis: Missouri Botanical Garden Press. pp. 541-724. |
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