粳稻子预44中稻瘟病数量抗性位点分析
? 共同第一作者
收稿日期: 2015-03-12
录用日期: 2015-06-05
网络出版日期: 2015-09-06
基金资助
国家自然科学基金(No;U1302261, No.31160223)
Quantitative Trait Loci Analysis of Rice Blast Resistance in Japonica Rice Variety Ziyu44
? These authors contributed equally to this paper
Received date: 2015-03-12
Accepted date: 2015-06-05
Online published: 2015-09-06
稻瘟病是世界范围内影响水稻(Oryza sativa)生产的主要病害。抗稻瘟病基因的发掘和育种利用是控制稻瘟病经济、环保的有效措施。为了揭示云南地方水稻品种子预44广谱持久抗瘟机制, 利用江南香糯和子预44杂交构建的F7重组自交群体, 采用苗期稻瘟病菌自然诱发接种法, 通过调查田间抗瘟性表型数据, 结合基因型数据对子预44中的数量抗瘟性位点进行了分析。结果表明, 在连锁系数(logarithm of odds, LOD)大于2.0的域值上, 共检测出13个QTLs, 分别位于第1、2、6、8、12号染色体上。不同位点表型贡献值差异较大, 范围为5.8%-21.9%, 其中8号染色体上标记RM72-RM404之间的QTLs可解释约61.9%的表型变异, 很可能为一个主效抗瘟QTL位点。多个位点的主效和微效抗性相结合可能是子预44持久稻瘟病抗性的分子基础。
周镕, 王波, 杨睿, 李书, 樊琳琳, 曾千春, 罗琼 . 粳稻子预44中稻瘟病数量抗性位点分析[J]. 植物学报, 2015 , 50(6) : 691 -698 . DOI: 10.11983/CBB15050
Rice blast, caused by Magnaporthe oryzae, is one of the most destructive diseases of rice worldwide. The development and use of resistant cultivars is considered the most economic, effective and environment-friendly method to control this disease. To understand the molecular mechanism of Ziyu44 for durable rice blast resistance, we inoculated 212 F7 recombinant inbred lines (F7RILs) derived from a cross between Ziyu44 and Jiangnan Xiangnuo (JNXN), a susceptible cultivar, naturally with Magnaporthe oryzae to evaluate rice field leaf-blast resistance. We detected 13 quantitative trait locus (QTLs) on chromosomes 1, 2, 6, 8 and 12. The resulting phenotypic variation due to a single QTL ranged from 5.8% to 21.9%. The QTL on chromosome 8 between simple sequence repeat markers RM72 and RM404 accounted for approximately 61.9% of the total phenotypic variation, which may be a major QTL locus. Durable resistance to rice blast in Ziyu44 may be due to the combination of major and minor resistance on multiple loci.
[1] | 陈红旗, 陈宗祥, 倪深, 左示敏, 潘学彪, 朱旭东 (2008). 利用分子标记技术聚合3个稻瘟病基因改良金23B的稻瘟病抗性. 中国水稻科学 22, 23-27. |
[2] | 董巍, 李信, 晏斌, 吴昌军, 高冠军, 包亮, 李一博, 朱雪萍, 何予卿 (2010). 利用分子标记辅助选择改良培矮64S的稻瘟病抗性. 分子植物育种 8, 853-860. |
[3] | 何月秋, 唐文华, Leung H, Zeigler RS (2001). CO39近等基因系抗稻瘟病性分析. 作物学报 27, 838-841. |
[4] | 黄红梅, 肖应辉, 黄玲, 奉光平, 燕玮婷, 戴良英, 王国梁, 刘二明 (2011). 湘资3150微效抗瘟性基因鉴定. 植物病理学报 41, 509-515. |
[5] | 雷财林, 凌忠专, 王久林, 蒋琬如 (2000). 北方稻区稻瘟病菌生理小种变化与抗病育种策略. 作物杂志 (3), 14-16. |
[6] | 李书, 李权, 樊琳琳, 沙莎, 曾千春, 罗琼 (2014). 高原粳稻子预44中三个稻瘟病抗性基因的假基因化分子标记鉴定. 分子植物育种 12, 219-225. |
[7] | 刘仁虎, 孟金陵 (2003). MapDraw, 在Excel中绘制遗传连锁图的宏. 遗传 25, 317-321. |
[8] | 刘士平, 李信, 汪朝阳, 李香花, 何予卿 (2003). 基因聚合对水稻稻瘟病的抗性影响. 分子植物育种 1, 22-26. |
[9] | 沈瑛, Adreit H, 朱旭东, Milazzo J, 陈红旗, Tharreau D (2004). 中国部分杂交稻和常规早籼、晚粳品种(系)的抗瘟性. 中国农业科学 37, 362-369. |
[10] | 吴俊, 刘雄伦, 戴良英, 王国梁 (2007). 水稻广谱抗稻瘟病基因研究进展. 生命科学 19, 233-238. |
[11] | 徐吉臣, 王久林, 凌忠专, 朱立煌 (2004). 利用QTL定位分析水稻的稻瘟病抗性基因. 科学通报 49, 245-251. |
[12] | 严大富, 花家禄, 陆凡, 王法明, 杨金龙, 陈以仁 (1999). 吴江稻区稻瘟病菌小种更替规律及抗瘟品种的利用. 江苏农业学报 15, 141-146. |
[13] | 张锦文, 洪汝科, 范静华, 张祎颖, 曾千春, 罗琼 (2011). 一份云南地方稻广谱持久抗稻瘟病初步分析. 西南农业学报 24, 1323-1326. |
[14] | 张佩胜, 赵春德, 余宁, 张迎信, 刘群恩 (2014). 稻瘟病抗性基因的克隆及应用研究进展. 中国稻米 20(5), 1-7. |
[15] | 郑康乐, 庄杰云, 王汉荣 (1998). 基因聚合提高了水稻对白叶枯病的抗性. 遗传 20(4), 4-6. |
[16] | Ashkani S, Rafii MY, Rahim HA, Latif MA (2013). Mapping of the quantitative trait locus (QTL) conferring partial resistance to rice leaf blast disease. Biotechnol Lett 35, 799-810. |
[17] | Ballini E, Morel JB, Droc G, Price A, Courtois B, Notte- ghem JL, Tharreau D (2008). A genome-wide meta- analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance.Mol Plant Microbe Interact 21, 859-868. |
[18] | Bonman JM, Mackill DJ (1988). Durable resistance to rice blast disease.Oryza 25, 103-110. |
[19] | Chen DH, Viña MD, Inukai T, Mackill DJ, Ronald PC, Nelson RJ (1999). Molecular mapping of the blast resistance gene, Pi44(t), in a line derived from a durably resistant rice cultivar.Theor Appl Genet 98, 1046-1053. |
[20] | Das A, Soubam D, Singh PK, Thakur S, Singh NK, Sharma TR (2012). A novel blast resistance gene, Pi54rh cloned from wild species of rice, Oryza rhizomatis confers broad spectrum resistance to Magnaporthe oryzae.Funct Integr Genom 12, 215-228. |
[21] | Deng YW, Zhu XD, Shen Y, He ZH (2006). Genetic characterization and fine mapping of the blast resistance locus Pigm(t) tightly linked to Pi2 and Pi9 in a broad- spectrum resistant Chinese variety.Theor Appl Genet 113, 705-713. |
[22] | Fukuoka S, Saka N, Koga H, Ono K, Shimizu T, Ebana K, Hayashi N, Takahashi A, Hirochika H, Okuno K, Yano M (2009). Loss of function of a proline-containing protein confers durable disease resistance in rice.Science 325, 998-1001. |
[23] | Hayashi N, Inoue H, Kato T, Funao T, Shirota M, Shimizu T, Kanamori H, Yamane H, Hayano-Saito Y, Matsumoto T, Yano M, Takatsuji H (2010). Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication.Plant J 64, 498-510. |
[24] | Hittalmani S, Parco A, Mew TV, Zeigler RS, Huang N (2000). Fine mapping and DNA marker-assisted pyrami- ding of the three major genes for blast resistance in rice.Theor Appl Genet 100, 1121-1128. |
[25] | Hua LX, Wu JZ, Chen CX, Wu WH, He XY, Lin F, Wang L, Ashikawa I, Matsumoto T, Wang L, Pan QH (2012). The isolation of Pi1, an allele at the Pik locus which confers broad spectrum resistance to rice blast.Theor Appl Genet 125, 1047-1055. |
[26] | Huan J, Bao YM, Wu YY, Zeng GY, He WW, Dang LL, Wang JF, Zhang HS (2014). Identification of quantitative trait loci conferring blast resistance in Bodao, a japonica rice landrace.Genet Mol Res 13, 9756-9765. |
[27] | Jiang JF, Mou TM, Yu HH, Zhou FS (2015). Molecular breeding of thermo-sensitive genic male sterile (TGMS) lines of rice for blast resistance using Pi2 gene. Rice 8, doi: 10.1186/s12284-015-0048-3. |
[28] | Li ZK, Luo LJ, Mei HW, Paterson AH, Zhao XH, Zhong DB, Wang YP, Yu XQ, Zhu L, Tabien R, Stansel JW, Ying CS (1999). A "defeated" rice resistance gene acts as a QTL against a virulent strain of Xanthomonas oryzae pv. oryzae. Mol Gen Genom 261, 58-63. |
[29] | Lincoln S, Daley M, Lander E (1992). Constructing genetic maps with MAPMAKER/EXP 3.0. 3rd edn. Cambridge: Whitehead Institute Technical Report. |
[30] | Liu B, Zhang SH, Zhu XY, Yang QY, Wu SZ, Mei MT, Mauleon R, Leach J, Mew T, Leung H (2004). Candidate defense genes as predictors of quantitative blast re- sistance in rice.Mol Plant Microbe Interact 17, 1146-1152. |
[31] | Liu XQ, Wang L, Chen S, Lin F, Pan QH (2005). Genetic and physical mapping of Pi36(t), a novel rice blast resistance gene located on rice chromosome 8.Mol Gen Genom 274, 394-401. |
[32] | Lü QM, Xu X, Shang JJ, Jiang GH, Pang ZQ, Zhou ZZ, Wang J, Liu Y, Li T, Li XB, Xu JC, Cheng ZK, Zhao XF, Li SG, Zhu LH (2013). Functional analysis of Pid3-A4, an ortholog of rice blast resistance gene Pid3 revealed by allele mining in common wild rice.Phytopathology 103, 594-599. |
[33] | Miah G, Rafii MY, Ismail MR, Puteh AB, Rahim HA, Asfaliza R, Latif MA (2013). Blast resistance in rice: a review of conventional breeding to molecular approa- ches.Mol Biol Rep 40, 2369-2388. |
[34] | Notteghem JL (1981). Comptes-rendus dusymposium sur la resistance du rizz a pyriculariose, Momtpellier, France. pp. 313-330. |
[35] | Talbot NJ (2003). On the trail of a cereal killer: exploring the biology of Magnaporthe grisea.Annu Rev Microbiol 57, 177-202. |
[36] | Tanweer FA, Rafii MY, Sijam K, Rahim HA, Ahmed F, Latif MA (2015). Current advance methods for the identification of blast resistance genes in rice.CR Biol 338, 321-334. |
[37] | Wang GL, Mackill DJ, Bonman JM, McCouch SR, Champoux MC, Nelson RJ (1994). RFLP mapping of genes conferring complete and partial resistance to blast in a durably resistant rice cultivar.Genetics 136, 1421-1434. |
[38] | Wang SC, Basten CJ, Gaffney P, Zeng ZB (2007). Windows QTL Cartographer 2.0 User Manual. Raleigh, North Carolina: Bioinformatics Research Center, North Carolina State University. |
[39] | Zhu XY, Chen S, Yang JY, Zhou SC, Zeng LX, Han JL, Su J, Wang L, Pan QH (2012). The identification of Pi50(t), a new member of the rice blast resistance Pi2/Pi9 multigene family.Theor Appl Genet 124, 1295-1304. |
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