图5. PAL3基因的单倍型分析
(A) PAL3基因结构及各单倍型变异所在位置; (B) PAL3在栽培稻中的单倍型。单倍型数据通过水稻分子育种整合组学知识库(MBKbase) (Peng et al., 2020)分析而来, 共包含2 187个栽培稻品种, 分析时去除了内含子变异、杂合变异和同义变异(-: 碱基对缺失); (C) Hap1和Hap3差异位点的保守性分析(Δ: Hap1和Hap3的差异位点)。

Figure 5. Haplotype analysis of PAL3
(A) Structure of PAL3 gene and the location of haplotypes; (B) Haplotypes of PAL3 in the cultivated rice. Haplotype data were analyzed by Rice Molecular Breeding Knowledgebase (MBKbase) (Peng et al., 2020), including 2 187 cultivated rice varieties. Variations on intron, heterozygous variations and synonymous variations were removed during analysis (-: The deletion of base pair); (C) Sequence alignment around the variation sites between Hap1 and hap3 (Δ: The variation sites between Hap1 and Hap3).