基于转录组的阿拉善地区多枝柽柳多态Genic-SSRs的识别与开发
张雅楠, 黄蕾, 李佳彬, 张雷, 党振华

Identification and Development of Polymorphic Genic-SSRs in Tamarix ramosissima in Alxa Region Based on Transcriptome
Yanan Zhang, Lei Huang, Jiabin Li, Lei Zhang, Zhenhua Dang
表3 14个多态Genic-SSRs标记的基本信息及遗传学参数
Table 3 Basic information and genetic parameters of the 14 polymorphic Genic-SSRs
SSR ID PS (5′→3′) RM Tm (°C) AS (bp) Na PIC Ho He
104 F: CAAGGAGGAGCTGTCGTCTG AG 59.9 123-139 8 0.516 0.286 0.558
R: GCAGACACGAAGTTTGCGAT
221 F: TGAAGCAGCTGTGTTGGTGA AT 53.4 158-162 3 0.562 0.321 0.645
R: TCCTCCTCGATTCCCTACTGA
300 F: GAAGGGTTTGGGTGTTTTCAGA AT 59.5 155-161 4 0.641 0.643 0.708
R: AAAACGCACCCTCTCAGCAG
392 F: CGCAACAAGCACAACATCCA CAG 57.9 100-109 4 0.407 0.608 0.489
R: GTTAACCGGTCGCACAACTG
438 F: GGCACCGATACACAAGGACA CCTT 55.4 192-204 4 0.512 0.500 0.593
R: CCCACAGGCTTACACCCATT
441 F: GCCACCGCCACATTTATCTT CGAG 50.8 106-122 5 0.520 0.286 0.570
R: GGAGCTTGACAGGTACAGCA
563 F: TCCTGTGCAACGAACTGAGT GA 51.7 176-186 6 0.593 0.536 0.666
R: GGGTTTAGCCATGGGTGACA
668 F: ATGGCGATGATGGAGCAACA GAG 59.9 146-173 7 0.711 0.429 0.758
R: AGGGATTGGCGGAAGTGAAG
670 F: GAAGACACAGCACCAAGGGA GAG 56.7 186-201 5 0.546 0.714 0.627
R: CGTCTTCCCCAAGTCCGATC
947 F: TCCCCACACGTAATCCCTTC TC 50.8 139-149 5 0.445 0.607 0.488
R: GCGGATGGAAGGAGAAGAGG
1024 F: TGCGCATTTCTTGATTGCCA TCT 52.1 168-180 5 0.476 0.464 0.516
R: GGGTTGATGCGGCTTGATTG
1053 F: GTCGACACTGCAAGCATCAC TG 56.7 202-204 2 0.293 0.036 0.363
R: GCACGTACGAGCACATCTCT
1093 F: GAATAGTGGTGGCGGGAGTC TGC 54.7 117-126 2 0.195 0.250 0.223
R: GCTTGGCATCGTACCCCTAT
1114 F: GGTCCTCAGTGTGGCCATAG TGG 54.1 156-171 4 0.487 0.214 0.543
R: GTGTTAGAGATGGCGGGCAA
Mean 4.5 0.493 0.421 0.553