被子植物小热激蛋白家族的比较基因组学分析

范凯, 叶方婷, 毛志君, 潘鑫峰, 李兆伟, 林文雄

Comparative Genomics of the Small Heat Shock Protein Family in Angiosperms

Kai Fan, Fangting Ye, Zhijun Mao, Xinfeng Pan, Zhaowei Li, Wenxiong Lin

表1 (续)

Table 1 (continued)

Protein name Locus name Subfamily Protein length (aa) Molecular weight (kDa) Theoretical pI Instability index Aliphatic index GRAVY NcsHSP21 GWHPAAYW019078 CI 156 17.38 5.69 54.61 75.00 -0.449 NcsHSP22 GWHPAAYW019481 CP 222 25.65 9.17 54.03 60.63 -0.880 NcsHSP23 GWHPAAYW022038 CI 159 18.24 5.60 65.94 69.18 -0.648 NcsHSP24 GWHPAAYW025914 CVI 160 18.57 5.82 41.67 70.00 -0.914 NcsHSP25 GWHPAAYW027820 ER 192 21.54 6.54 31.35 102.08 -0.202 NcsHSP26 GWHPAAYW027821 ER 676 74.58 5.31 41.90 85.41 -0.292 NcsHSP27 GWHPAAYW027823 ER 180 20.20 9.21 61.79 73.67 -0.636 NcsHSP28 GWHPAAYW027825 ER 191 21.24 7.93 29.89 91.41 -0.376 NcsHSP29 GWHPAAYW027826 ER 191 21.48 6.00 34.01 98.53 -0.246 NcsHSP30 GWHPAAYW027987 CP 226 25.18 6.65 50.88 75.88 -0.522 NcsHSP31 GWHPAAYW030961 ER 133 15.78 10.21 41.23 77.59 -0.929 NcsHSP32 GWHPAAYW030963 ER 126 14.05 5.63 37.53 109.13 -0.024 NcsHSP33 GWHPAAYW030964 ER 143 15.67 6.08 33.52 109.16 0.075 OssHSP01 LOC_Os01g04340.1 CI 150 16.65 6.31 34.230 77.200 -0.536 OssHSP02 LOC_Os01g04350.1 CI 166 17.89 4.96 55.210 87.590 0.051 OssHSP03 LOC_Os01g04360.1 CI 149 16.90 6.76 47.050 69.870 -0.648 OssHSP04 LOC_Os01g04370.1 CI 150 16.94 6.18 52.240 76.530 -0.605 OssHSP05 LOC_Os01g04380.1 CI 150 16.96 6.18 52.240 73.930 -0.617 OssHSP06 LOC_Os01g08860.1 CII 166 18.03 5.61 45.580 78.130 -0.386 OssHSP07 LOC_Os02g03570.1 CI 177 18.87 6.93 52.450 71.750 -0.406 OssHSP08 LOC_Os02g10710.1 MTII 219 23.59 7.74 47.270 86.030 -0.320 OssHSP09 LOC_Os02g12610.1 CII 175 19.02 5.73 39.010 84.060 -0.486 OssHSP10 LOC_Os02g48140.1 CVII 164 17.77 6.97 46.260 67.320 -0.534 OssHSP11 LOC_Os02g52150.1 MTI/CP 221 24.15 7.96 48.750 77.330 -0.519 OssHSP12 LOC_Os02g54140.1 CIII 172 18.60 7.85 40.550 77.150 -0.538 OssHSP13 LOC_Os03g14180.1 CP 240 26.66 6.78 53.350 75.120 -0.541 OssHSP14 LOC_Os03g15960.1 CI 161 17.91 5.79 57.860 64.780 -0.680 OssHSP15 LOC_Os03g16020.1 CI 154 17.37 6.18 49.280 66.430 -0.706 OssHSP16 LOC_Os03g16030.1 CI 161 18.08 6.77 58.690 61.680 -0.746 OssHSP17 LOC_Os03g16040.1 CI 159 17.66 6.18 55.510 66.790 -0.719 OssHSP18 LOC_Os04g36750.1 ER 215 23.23 5.34 35.060 82.650 -0.365 OssHSP19 LOC_Os05g23140.1 CP 251 27.64 9.42 39.120 69.240 -0.488 OssHSP20 LOC_Os05g42120.1 CV 203 22.28 4.82 54.030 69.800 -0.330 OssHSP21 LOC_Os06g11610.1 MTI/CP 248 26.23 5.27 43.470 79.270 -0.323 OssHSP22 LOC_Os06g14240.1 PX 146 16.02 8.13 36.730 84.790 -0.292 OssHSP23 LOC_Os07g33350.1 CIV 219 23.76 11.74 93.800 71.320 -0.642 OssHSP24 LOC_Os11g13980.1 ER 206 21.87 6.01 48.890 81.500 -0.126 AtsHSP01 AT1G07400.1 CI 157 17.83 5.99 43.380 70.060 -0.680 AtsHSP02 AT1G52560.1 MTII 232 26.54 6.86 45.660 68.880 -0.869 AtsHSP03 AT1G53540.1 CI 157 17.60 5.36 53.800 71.970 -0.578 AtsHSP04 AT1G54050.1 CIII 155 17.36 7.88 58.630 93.680 -0.504 AtsHSP05 AT1G59860.1 CI 155 17.62 6.85 50.240 70.970 -0.678 AtsHSP06 AT2G29500.1 CI 153 17.56 6.33 47.820 71.900 -0.720 AtsHSP07 AT3G46230.1 CI 156 17.44 5.20 46.980 68.590 -0.569