被子植物小热激蛋白家族的比较基因组学分析

范凯, 叶方婷, 毛志君, 潘鑫峰, 李兆伟, 林文雄

Comparative Genomics of the Small Heat Shock Protein Family in Angiosperms

Kai Fan, Fangting Ye, Zhijun Mao, Xinfeng Pan, Zhaowei Li, Wenxiong Lin

表1 睡莲、水稻、拟南芥和葡萄中sHSP成员的鉴定及结构分析

Table 1 The identification and structural analysis of the sHSP members in waterlily, rice, Arabidopsis and grape

Protein name Locus name Subfamily Protein length (aa) Molecular weight (kDa) Theoretical pI Instability index Aliphatic index GRAVY NcsHSP01 GWHPAAYW001658 CI 60 6.64 9.16 41.10 99.00 -0.218 NcsHSP02 GWHPAAYW001878 CII 308 34.77 9.03 44.31 74.64 -0.624 NcsHSP03 GWHPAAYW002745 CV 276 30.85 4.88 44.78 77.36 -0.291 NcsHSP04 GWHPAAYW004666 PX 1189 132.46 5.86 44.51 85.53 -0.300 NcsHSP05 GWHPAAYW006130 ER 218 24.32 5.46 64.70 95.14 -0.411 NcsHSP06 GWHPAAYW006158 CII 378 43.02 8.36 50.40 74.76 -0.780 NcsHSP07 GWHPAAYW006159 CII 662 75.02 9.13 55.90 79.64 -0.665 NcsHSP08 GWHPAAYW006161 CII 314 35.79 8.86 47.40 79.39 -0.709 NcsHSP09 GWHPAAYW006746 CIII 164 18.56 5.75 53.09 81.28 -0.489 NcsHSP10 GWHPAAYW007213 CIV 132 14.36 6.83 58.83 82.80 -0.117 NcsHSP11 GWHPAAYW009125 CII 165 19.09 5.48 54.83 69.03 -0.921 NcsHSP12 GWHPAAYW010630 MTII 235 26.36 6.79 56.35 67.57 -0.687 NcsHSP13 GWHPAAYW010715 CI 129 15.42 9.12 60.26 59.53 -1.343 NcsHSP14 GWHPAAYW013759 CVI 154 17.47 5.57 46.32 73.96 -0.573 NcsHSP15 GWHPAAYW014339 CI 156 17.60 5.24 55.71 73.72 -0.552 NcsHSP16 GWHPAAYW014344 CI 158 18.29 8.92 54.19 74.05 -0.682 NcsHSP17 GWHPAAYW015449 MTI/CP 208 23.47 6.01 36.92 78.75 -0.667 NcsHSP18 GWHPAAYW018459 CI 833 94.56 6.14 53.05 69.45 -0.668 NcsHSP19 GWHPAAYW019072 CI 163 18.55 6.19 62.44 71.04 -0.601 NcsHSP20 GWHPAAYW019077 CI 337 37.62 7.83 57.71 78.66 -0.457