蕨类植物rpoC1内含子缺失及其分子进化速率

彭阳,苏应娟,王艇

Intron Loss and Molecular Evolution Rate of rpoC1 in Ferns

Yang Peng,Yingjuan Su,Ting Wang

表1 植物材料名称和叶绿体基因组序列GenBank登录号

Table 1 Plant materials used in this study and GenBank accession numbers of chloroplast genome sequences

Family name Species GenBank accession number Length (bp) Aspleniaceae Asplenium pekinense KY427331 152479 As. prolongatum KY427332 151115 Hymenasplenium unilaterale KY427350 151723 Athyriaceae Athyrium anisopterum NC_035738 151284 At. opacum KY427335 150979 At. sheareri KY427330 151068 At. sinense KY427333 151319 Deparia lancea KY427338 151011 De. pycnosora KY427339 151126 De. viridifrons KY427340 150939 Diplazium bellum KY427343 151601 Di. dilatatum KY427344 151114 Di. dushanense KY427345 150179 Di. striatum KY427346 150779 Di. unilobum KY427347 127840 Blechnaceae Austroblechnum melanocaulon KY427334 150202 Woodwardia unigemmata NC_028543 153717 Cibotiaceae Cibotium barometz MH105066 166027 Cyatheaceae Alsophila podophylla MG262389 166151 Al. spinulosa NC_012818 156661 Cystopteridaceae Cystopteris chinensis KY427337 151269 Family name Species GenBank accession number Length (bp) Dennstaedtiaceae Pteridium aquilinum NC_014348 152362 Diplaziopsidaceae Diplaziopsis cavaleriana KY427341 151934 Dip. javanica KY427342 151496 Homalosorus pycnocarpos KY427349 152159 Dryopteridaceae Cyrtomium devexiscapulae NC_028542 151684 C. falcatum NC_028705 151628 C. fortunei MG913607 151699 Dryopteris decipiens KY427348 150987 Dr. fragrans KX418656 151978 Equisetaceae Equisetum arvense NC_014699 133309 E. hyemale NC_020146 131760 Hymenophyllaceae Callistopteris apiifolia MH265125 144918 Hymenophyllum holochilum MH265124 142214 Vandenboschia speciosa NC_041000 146874 Hypodematiaceae Hypodematium crenatum KY427351 149794 Lygodiaceae Lygodium japonicum NC_022136 157260 L. microphyllum NC_039378 158891 Marattiaceae Angiopteris angustifolia NC_026300 153596 An. evecta NC_008829 153901 Marsileaceae Marsilea crenata NC_022137 151628 Pilularia americana KY863504 153076 Onocleaceae Matteuccia struthiopteris KY427353 151003 Onoclea sensibilis KY427354 148395 Ophioglossaceae Botrychium ternatum KM817789 139127 Helminthostachys zeylanica KM817788 145120 Mankyua chejuensis NC_017006 146221 Osmundaceae Osmundastrum cinnamomeum NC_024157 142812 Polypodiaceae Lepisorus clathratus NC_035739 156998 Polypodium glycyrrhiza KP136832 129223 Psilotaceae Psilotum nudum NC_003386 138829 Pteridaceae Adiantum shastense MG432483 150414 Ceratopteris richardii KM052729 148444 Myriopteris lindheimeri NC_014592 155770 Rhachidosoraceae Rhachidosorus consimilis KY427356 152642 Schizaeaceae Schizaea elegans KX258660 156603 S. pectinata KX258661 156392 Thelypteridaceae Ampelopteris prolifera KY427329 151772 Christella appendiculata NC_035842 151571 Macrothelypteris torresiana KY427352 151130 Pseudophegopteris aurita KY427355 149917 Stegnogramma sagittifolia KY427357 151132 Woodsiaceae Woodsia macrochlaena KY427358 150987 W. polystichoides KY427359 150685